Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDH23Q9H251 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDH23Q9H251 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDH23Q9H251 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CDH23Q9H251 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CDH23Q9H251 AL671277.2-201ENST00000458060 996 ntBASIC21.33■■□□□ 1.01
CDH23Q9H251 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.33■■□□□ 1.01
CDH23Q9H251 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDH23Q9H251 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDH23Q9H251 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDH23Q9H251 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CDH23Q9H251 AC012313.10-201ENST00000623509 926 ntBASIC21.33■■□□□ 1.01
CDH23Q9H251 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CDH23Q9H251 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDH23Q9H251 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDH23Q9H251 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDH23Q9H251 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
CDH23Q9H251 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDH23Q9H251 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDH23Q9H251 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.33■■□□□ 1
CDH23Q9H251 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.33■■□□□ 1
CDH23Q9H251 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.33■■□□□ 1
CDH23Q9H251 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDH23Q9H251 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
CDH23Q9H251 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDH23Q9H251 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH23Q9H251 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CDH23Q9H251 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.32■■□□□ 1
CDH23Q9H251 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH23Q9H251 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDH23Q9H251 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDH23Q9H251 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.32■■□□□ 1
CDH23Q9H251 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDH23Q9H251 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDH23Q9H251 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDH23Q9H251 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CDH23Q9H251 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH23Q9H251 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CDH23Q9H251 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CDH23Q9H251 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.32■■□□□ 1
CDH23Q9H251 AC092647.4-201ENST00000457211 535 ntBASIC21.32■■□□□ 1
CDH23Q9H251 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.32■■□□□ 1
CDH23Q9H251 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.32■■□□□ 1
CDH23Q9H251 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH23Q9H251 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
CDH23Q9H251 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH23Q9H251 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDH23Q9H251 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.31■■□□□ 1
CDH23Q9H251 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.31■■□□□ 1
CDH23Q9H251 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.31■■□□□ 1
CDH23Q9H251 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDH23Q9H251 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CDH23Q9H251 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CDH23Q9H251 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH23Q9H251 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.31■■□□□ 1
CDH23Q9H251 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH23Q9H251 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.31■■□□□ 1
CDH23Q9H251 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.31■■□□□ 1
CDH23Q9H251 PGM5P4-201ENST00000421970 445 ntBASIC21.31■■□□□ 1
CDH23Q9H251 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.31■■□□□ 1
CDH23Q9H251 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.31■■□□□ 1
CDH23Q9H251 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDH23Q9H251 PTBP1P-201ENST00000554374 1601 ntBASIC21.31■■□□□ 1
CDH23Q9H251 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CDH23Q9H251 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH23Q9H251 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH23Q9H251 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDH23Q9H251 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDH23Q9H251 AP000593.1-201ENST00000393668 712 ntBASIC21.3■■□□□ 1
CDH23Q9H251 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.3■■□□□ 1
CDH23Q9H251 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDH23Q9H251 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.3■■□□□ 1
CDH23Q9H251 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.3■■□□□ 1
CDH23Q9H251 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH23Q9H251 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
CDH23Q9H251 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH23Q9H251 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDH23Q9H251 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH23Q9H251 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.3■■□□□ 1
CDH23Q9H251 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.3■■□□□ 1
CDH23Q9H251 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDH23Q9H251 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CDH23Q9H251 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.3■■□□□ 1
CDH23Q9H251 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDH23Q9H251 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.3■■□□□ 1
CDH23Q9H251 AC011558.1-201ENST00000623459 338 ntBASIC21.3■■□□□ 1
CDH23Q9H251 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
CDH23Q9H251 AC096733.2-201ENST00000609937 1394 ntBASIC21.29■■□□□ 1
CDH23Q9H251 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH23Q9H251 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
CDH23Q9H251 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.29■■□□□ 1
CDH23Q9H251 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.29■■□□□ 1
CDH23Q9H251 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.29■■□□□ 1
CDH23Q9H251 AC083849.1-201ENST00000615227 514 ntBASIC21.29■■□□□ 1
CDH23Q9H251 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.29■■□□□ 1
CDH23Q9H251 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDH23Q9H251 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.29■■□□□ 1
CDH23Q9H251 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.29■■□□□ 1
CDH23Q9H251 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CDH23Q9H251 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms