Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
SLC46A2Q9BY10 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC46A2Q9BY10 AC097493.4-201ENST00000641197 219 ntBASIC20.64■□□□□ 0.89
SLC46A2Q9BY10 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC46A2Q9BY10 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC46A2Q9BY10 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC46A2Q9BY10 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC46A2Q9BY10 AC092720.2-201ENST00000602388 1665 ntBASIC20.64■□□□□ 0.89
SLC46A2Q9BY10 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC46A2Q9BY10 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 NUDT16P1-203ENST00000513809 620 ntBASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 KRT18P21-201ENST00000515767 1272 ntBASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC46A2Q9BY10 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 MMP23A-201ENST00000234610 1017 ntBASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC46A2Q9BY10 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 REXO1L10P-201ENST00000615707 1290 ntBASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 CR392000.1-201ENST00000624770 1228 ntBASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC46A2Q9BY10 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 AC116351.2-201ENST00000606540 1585 ntBASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 AP006587.1-201ENST00000534129 1502 ntBASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 NIFKP9-201ENST00000419265 221 ntBASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 KSR1P1-201ENST00000446298 240 ntBASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 RBM17P1-201ENST00000453646 1190 ntBASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 KRT16P6-202ENST00000425692 1426 ntBASIC20.6■□□□□ 0.89
SLC46A2Q9BY10 TFP1-202ENST00000475455 1573 ntBASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 AC079598.2-202ENST00000546624 1451 ntBASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 MIR1224-201ENST00000408193 85 ntBASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.59■□□□□ 0.89
SLC46A2Q9BY10 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms