Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 BX323043.1-201ENST00000641006 1765 ntBASIC11.83□□□□□ -0.52
LIMD2Q9BT23 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 PARP1-202ENST00000366792 553 ntTSL 3 BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 AC016769.1-201ENST00000409132 1010 ntBASIC11.83□□□□□ -0.52
LIMD2Q9BT23 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 SLC7A5P2-201ENST00000553010 536 ntBASIC11.83□□□□□ -0.52
LIMD2Q9BT23 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 MYCNOS-205ENST00000641950 531 ntBASIC11.83□□□□□ -0.52
LIMD2Q9BT23 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 AC007225.1-201ENST00000566331 1836 ntBASIC11.83□□□□□ -0.52
LIMD2Q9BT23 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 PLK5-205ENST00000642079 1969 ntBASIC11.83□□□□□ -0.52
LIMD2Q9BT23 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LIMD2Q9BT23 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 ME2-216ENST00000639850 2331 ntTSL 5 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 NTF6G-201ENST00000591094 616 ntBASIC11.82□□□□□ -0.52
LIMD2Q9BT23 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 MIR6821-201ENST00000617625 74 ntBASIC11.82□□□□□ -0.52
LIMD2Q9BT23 FGF8-207ENST00000618991 856 ntTSL 3 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 AC020916.1-201ENST00000587762 1774 ntBASIC11.82□□□□□ -0.52
LIMD2Q9BT23 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LIMD2Q9BT23 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 FP700111.2-201ENST00000619190 1892 ntBASIC11.81□□□□□ -0.52
LIMD2Q9BT23 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 RBM17P2-201ENST00000616397 1405 ntBASIC11.81□□□□□ -0.52
LIMD2Q9BT23 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms