Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.21■□□□□ 0.35
SDHCQ99643 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDHCQ99643 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.21■□□□□ 0.35
SDHCQ99643 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDHCQ99643 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SDHCQ99643 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.21■□□□□ 0.35
SDHCQ99643 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SDHCQ99643 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SDHCQ99643 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.21■□□□□ 0.35
SDHCQ99643 BX664725.1-201ENST00000438252 379 ntBASIC17.21■□□□□ 0.35
SDHCQ99643 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDHCQ99643 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDHCQ99643 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDHCQ99643 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDHCQ99643 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.21■□□□□ 0.35
SDHCQ99643 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDHCQ99643 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDHCQ99643 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDHCQ99643 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SDHCQ99643 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SDHCQ99643 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SDHCQ99643 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SDHCQ99643 AC012313.1-201ENST00000593393 3059 ntBASIC17.2■□□□□ 0.34
SDHCQ99643 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SDHCQ99643 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.2■□□□□ 0.34
SDHCQ99643 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SDHCQ99643 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SDHCQ99643 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SDHCQ99643 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SDHCQ99643 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SDHCQ99643 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.2■□□□□ 0.34
SDHCQ99643 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SDHCQ99643 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.2■□□□□ 0.34
SDHCQ99643 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.2■□□□□ 0.34
SDHCQ99643 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SDHCQ99643 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SDHCQ99643 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SDHCQ99643 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SDHCQ99643 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SDHCQ99643 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SDHCQ99643 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.19■□□□□ 0.34
SDHCQ99643 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.19■□□□□ 0.34
SDHCQ99643 AC099398.1-201ENST00000567919 2776 ntBASIC17.19■□□□□ 0.34
SDHCQ99643 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
SDHCQ99643 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SDHCQ99643 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SDHCQ99643 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SDHCQ99643 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.19■□□□□ 0.34
SDHCQ99643 AL033527.3-201ENST00000566366 1196 ntBASIC17.19■□□□□ 0.34
SDHCQ99643 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.19■□□□□ 0.34
SDHCQ99643 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SDHCQ99643 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SDHCQ99643 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SDHCQ99643 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SDHCQ99643 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.19■□□□□ 0.34
SDHCQ99643 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SDHCQ99643 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SDHCQ99643 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SDHCQ99643 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SDHCQ99643 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SDHCQ99643 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SDHCQ99643 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.19■□□□□ 0.34
SDHCQ99643 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.19■□□□□ 0.34
SDHCQ99643 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SDHCQ99643 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SDHCQ99643 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SDHCQ99643 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SDHCQ99643 AL031598.1-201ENST00000561511 1773 ntBASIC17.18■□□□□ 0.34
SDHCQ99643 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SDHCQ99643 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.18■□□□□ 0.34
SDHCQ99643 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SDHCQ99643 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SDHCQ99643 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SDHCQ99643 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.18■□□□□ 0.34
SDHCQ99643 AL031848.2-201ENST00000607670 837 ntBASIC17.18■□□□□ 0.34
SDHCQ99643 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.18■□□□□ 0.34
SDHCQ99643 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SDHCQ99643 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SDHCQ99643 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SDHCQ99643 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SDHCQ99643 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SDHCQ99643 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SDHCQ99643 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SDHCQ99643 SYT6-210ENST00000641643 1587 ntBASIC17.18■□□□□ 0.34
SDHCQ99643 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
SDHCQ99643 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SDHCQ99643 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SDHCQ99643 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SDHCQ99643 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SDHCQ99643 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SDHCQ99643 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SDHCQ99643 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.17■□□□□ 0.34
SDHCQ99643 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SDHCQ99643 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.17■□□□□ 0.34
SDHCQ99643 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
SDHCQ99643 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SDHCQ99643 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.17■□□□□ 0.34
SDHCQ99643 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SDHCQ99643 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SDHCQ99643 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms