Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.67■□□□□ 0.9
NOTCH4Q99466 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NOTCH4Q99466 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NOTCH4Q99466 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOTCH4Q99466 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.67■□□□□ 0.9
NOTCH4Q99466 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOTCH4Q99466 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOTCH4Q99466 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOTCH4Q99466 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NOTCH4Q99466 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOTCH4Q99466 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NOTCH4Q99466 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOTCH4Q99466 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 TERF1P1-201ENST00000311003 1181 ntBASIC20.66■□□□□ 0.9
NOTCH4Q99466 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOTCH4Q99466 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOTCH4Q99466 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NOTCH4Q99466 AL031985.4-201ENST00000642138 673 ntBASIC20.66■□□□□ 0.9
NOTCH4Q99466 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOTCH4Q99466 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NOTCH4Q99466 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NOTCH4Q99466 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOTCH4Q99466 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOTCH4Q99466 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOTCH4Q99466 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 AC026310.3-201ENST00000625186 2373 ntBASIC20.66■□□□□ 0.9
NOTCH4Q99466 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOTCH4Q99466 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 AC011506.1-201ENST00000474329 610 ntBASIC20.66■□□□□ 0.9
NOTCH4Q99466 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NOTCH4Q99466 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOTCH4Q99466 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.66■□□□□ 0.9
NOTCH4Q99466 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NOTCH4Q99466 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NOTCH4Q99466 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NOTCH4Q99466 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NOTCH4Q99466 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 AC026271.3-201ENST00000571884 352 ntBASIC20.65■□□□□ 0.9
NOTCH4Q99466 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NOTCH4Q99466 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NOTCH4Q99466 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NOTCH4Q99466 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NOTCH4Q99466 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NOTCH4Q99466 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.65■□□□□ 0.9
NOTCH4Q99466 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NOTCH4Q99466 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NOTCH4Q99466 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.64■□□□□ 0.9
NOTCH4Q99466 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NOTCH4Q99466 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NOTCH4Q99466 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NOTCH4Q99466 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NOTCH4Q99466 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NOTCH4Q99466 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NOTCH4Q99466 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NOTCH4Q99466 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.64■□□□□ 0.89
NOTCH4Q99466 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.64■□□□□ 0.89
NOTCH4Q99466 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.64■□□□□ 0.89
NOTCH4Q99466 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.64■□□□□ 0.89
NOTCH4Q99466 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.64■□□□□ 0.89
NOTCH4Q99466 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NOTCH4Q99466 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NOTCH4Q99466 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NOTCH4Q99466 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
NOTCH4Q99466 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NOTCH4Q99466 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.64■□□□□ 0.89
NOTCH4Q99466 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.64■□□□□ 0.89
NOTCH4Q99466 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NOTCH4Q99466 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NOTCH4Q99466 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NOTCH4Q99466 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NOTCH4Q99466 HLA-G-202ENST00000376815 851 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms