Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUDCD1Q96RS6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUDCD1Q96RS6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUDCD1Q96RS6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.57■□□□□ 0.88
NUDCD1Q96RS6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NUDCD1Q96RS6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUDCD1Q96RS6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 DUSP5P2-201ENST00000426873 1033 ntBASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 AC069152.1-201ENST00000438030 544 ntBASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 AC098934.4-201ENST00000564127 592 ntBASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 AC133041.1-202ENST00000642053 222 ntBASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD1Q96RS6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 AC091874.3-201ENST00000512672 1195 ntBASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD1Q96RS6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 C2orf69P4-201ENST00000565394 541 ntBASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.53■□□□□ 0.88
NUDCD1Q96RS6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms