Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CASD1Q96PB1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.37■■□□□ 1.01
CASD1Q96PB1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CASD1Q96PB1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.37■■□□□ 1.01
CASD1Q96PB1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.37■■□□□ 1.01
CASD1Q96PB1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.37■■□□□ 1.01
CASD1Q96PB1 FITM1-202ENST00000559294 800 ntBASIC21.37■■□□□ 1.01
CASD1Q96PB1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CASD1Q96PB1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.37■■□□□ 1.01
CASD1Q96PB1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.37■■□□□ 1.01
CASD1Q96PB1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CASD1Q96PB1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CASD1Q96PB1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CASD1Q96PB1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.37■■□□□ 1.01
CASD1Q96PB1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.37■■□□□ 1.01
CASD1Q96PB1 CYP2D8P-201ENST00000433633 1490 ntBASIC21.37■■□□□ 1.01
CASD1Q96PB1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CASD1Q96PB1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CASD1Q96PB1 AC116351.2-201ENST00000606540 1585 ntBASIC21.36■■□□□ 1.01
CASD1Q96PB1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.36■■□□□ 1.01
CASD1Q96PB1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CASD1Q96PB1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CASD1Q96PB1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CASD1Q96PB1 C1QL1P1-201ENST00000568105 661 ntBASIC21.36■■□□□ 1.01
CASD1Q96PB1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.36■■□□□ 1.01
CASD1Q96PB1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CASD1Q96PB1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CASD1Q96PB1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CASD1Q96PB1 AC007225.1-201ENST00000566331 1836 ntBASIC21.36■■□□□ 1.01
CASD1Q96PB1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.36■■□□□ 1.01
CASD1Q96PB1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.36■■□□□ 1.01
CASD1Q96PB1 TFP1-202ENST00000475455 1573 ntBASIC21.36■■□□□ 1.01
CASD1Q96PB1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASD1Q96PB1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CASD1Q96PB1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.35■■□□□ 1.01
CASD1Q96PB1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CASD1Q96PB1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.35■■□□□ 1.01
CASD1Q96PB1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.35■■□□□ 1.01
CASD1Q96PB1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.35■■□□□ 1.01
CASD1Q96PB1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.35■■□□□ 1.01
CASD1Q96PB1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CASD1Q96PB1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.35■■□□□ 1.01
CASD1Q96PB1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.35■■□□□ 1.01
CASD1Q96PB1 AC005363.2-201ENST00000618631 242 ntBASIC21.35■■□□□ 1.01
CASD1Q96PB1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASD1Q96PB1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
CASD1Q96PB1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASD1Q96PB1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASD1Q96PB1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASD1Q96PB1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.35■■□□□ 1.01
CASD1Q96PB1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.35■■□□□ 1.01
CASD1Q96PB1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CASD1Q96PB1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CASD1Q96PB1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CASD1Q96PB1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.34■■□□□ 1.01
CASD1Q96PB1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CASD1Q96PB1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.34■■□□□ 1.01
CASD1Q96PB1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CASD1Q96PB1 AC010947.1-201ENST00000623454 693 ntBASIC21.34■■□□□ 1.01
CASD1Q96PB1 AC092865.7-201ENST00000641832 219 ntBASIC21.34■■□□□ 1.01
CASD1Q96PB1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CASD1Q96PB1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CASD1Q96PB1 LINC01568-207ENST00000641790 1380 ntBASIC21.34■■□□□ 1.01
CASD1Q96PB1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CASD1Q96PB1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CASD1Q96PB1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.33■■□□□ 1.01
CASD1Q96PB1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.33■■□□□ 1.01
CASD1Q96PB1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CASD1Q96PB1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CASD1Q96PB1 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.33■■□□□ 1.01
CASD1Q96PB1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.33■■□□□ 1.01
CASD1Q96PB1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.33■■□□□ 1.01
CASD1Q96PB1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CASD1Q96PB1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CASD1Q96PB1 AC005521.1-201ENST00000393351 872 ntBASIC21.33■■□□□ 1.01
CASD1Q96PB1 MESTP1-201ENST00000404287 994 ntBASIC21.33■■□□□ 1.01
CASD1Q96PB1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.33■■□□□ 1.01
CASD1Q96PB1 NAPSB-206ENST00000562112 1266 ntBASIC21.33■■□□□ 1.01
CASD1Q96PB1 AL445228.2-201ENST00000605589 952 ntBASIC21.33■■□□□ 1.01
CASD1Q96PB1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CASD1Q96PB1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CASD1Q96PB1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.33■■□□□ 1
CASD1Q96PB1 AC079834.2-201ENST00000609776 1949 ntBASIC21.33■■□□□ 1
CASD1Q96PB1 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.33■■□□□ 1
CASD1Q96PB1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CASD1Q96PB1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CASD1Q96PB1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.32■■□□□ 1
CASD1Q96PB1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.32■■□□□ 1
CASD1Q96PB1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CASD1Q96PB1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CASD1Q96PB1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CASD1Q96PB1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CASD1Q96PB1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.32■■□□□ 1
CASD1Q96PB1 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.32■■□□□ 1
CASD1Q96PB1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.32■■□□□ 1
CASD1Q96PB1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CASD1Q96PB1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CASD1Q96PB1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.32■■□□□ 1
CASD1Q96PB1 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.32■■□□□ 1
CASD1Q96PB1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms