Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NECTIN4Q96NY8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NECTIN4Q96NY8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NECTIN4Q96NY8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NECTIN4Q96NY8 UPK3BP1-201ENST00000428678 509 ntBASIC20.71■□□□□ 0.91
NECTIN4Q96NY8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.71■□□□□ 0.91
NECTIN4Q96NY8 AC063952.2-201ENST00000498792 1227 ntBASIC20.71■□□□□ 0.91
NECTIN4Q96NY8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
NECTIN4Q96NY8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.71■□□□□ 0.91
NECTIN4Q96NY8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.71■□□□□ 0.91
NECTIN4Q96NY8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NECTIN4Q96NY8 AP006587.1-201ENST00000534129 1502 ntBASIC20.71■□□□□ 0.91
NECTIN4Q96NY8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NECTIN4Q96NY8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.7■□□□□ 0.91
NECTIN4Q96NY8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 AC097488.1-201ENST00000507834 756 ntBASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN4Q96NY8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
NECTIN4Q96NY8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 CRYGFP-201ENST00000418459 633 ntBASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 AC131212.4-201ENST00000623606 975 ntBASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NECTIN4Q96NY8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 FAM87A-204ENST00000613235 858 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms