Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC26.22■■□□□ 1.79
PHACTR3Q96KR7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PHACTR3Q96KR7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PHACTR3Q96KR7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 AL391422.3-201ENST00000603791 2761 ntBASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 AL162377.1-201ENST00000618844 1793 ntBASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PHACTR3Q96KR7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PHACTR3Q96KR7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 BX119927.1-201ENST00000636596 1552 ntBASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PHACTR3Q96KR7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 SNORA78-201ENST00000459373 127 ntBASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 MIR4497-201ENST00000583208 89 ntBASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
PHACTR3Q96KR7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 AC012618.2-201ENST00000428058 849 ntBASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 AC116351.2-201ENST00000606540 1585 ntBASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC26.18■■□□□ 1.78
PHACTR3Q96KR7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PHACTR3Q96KR7 TFP1-202ENST00000475455 1573 ntBASIC26.17■■□□□ 1.78
PHACTR3Q96KR7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC26.17■■□□□ 1.78
PHACTR3Q96KR7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PHACTR3Q96KR7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PHACTR3Q96KR7 MIR718-201ENST00000390190 70 ntBASIC26.17■■□□□ 1.78
PHACTR3Q96KR7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC26.17■■□□□ 1.78
PHACTR3Q96KR7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
PHACTR3Q96KR7 AC018553.1-201ENST00000616682 1458 ntBASIC26.17■■□□□ 1.78
PHACTR3Q96KR7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PHACTR3Q96KR7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PHACTR3Q96KR7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 KRT16P6-202ENST00000425692 1426 ntBASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 TSPY7P-201ENST00000431358 1114 ntBASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 KRT16P5-201ENST00000455284 522 ntBASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 RARRES2P10-201ENST00000564312 460 ntBASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC26.16■■□□□ 1.78
PHACTR3Q96KR7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms