Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.49■□□□□ 0.87
IFT43Q96FT9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
IFT43Q96FT9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.49■□□□□ 0.87
IFT43Q96FT9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 LSM12P1-201ENST00000411836 588 ntBASIC20.49■□□□□ 0.87
IFT43Q96FT9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.49■□□□□ 0.87
IFT43Q96FT9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
IFT43Q96FT9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.49■□□□□ 0.87
IFT43Q96FT9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.49■□□□□ 0.87
IFT43Q96FT9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.49■□□□□ 0.87
IFT43Q96FT9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
IFT43Q96FT9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
IFT43Q96FT9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
IFT43Q96FT9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
IFT43Q96FT9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IFT43Q96FT9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IFT43Q96FT9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.48■□□□□ 0.87
IFT43Q96FT9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
IFT43Q96FT9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IFT43Q96FT9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IFT43Q96FT9 KRT18P29-201ENST00000397031 1267 ntBASIC20.48■□□□□ 0.87
IFT43Q96FT9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IFT43Q96FT9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.48■□□□□ 0.87
IFT43Q96FT9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IFT43Q96FT9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IFT43Q96FT9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IFT43Q96FT9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.48■□□□□ 0.87
IFT43Q96FT9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IFT43Q96FT9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IFT43Q96FT9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IFT43Q96FT9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IFT43Q96FT9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IFT43Q96FT9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.47■□□□□ 0.87
IFT43Q96FT9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.47■□□□□ 0.87
IFT43Q96FT9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IFT43Q96FT9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IFT43Q96FT9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IFT43Q96FT9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IFT43Q96FT9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IFT43Q96FT9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IFT43Q96FT9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IFT43Q96FT9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IFT43Q96FT9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
IFT43Q96FT9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.47■□□□□ 0.87
IFT43Q96FT9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
IFT43Q96FT9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
IFT43Q96FT9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IFT43Q96FT9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IFT43Q96FT9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IFT43Q96FT9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IFT43Q96FT9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.47■□□□□ 0.87
IFT43Q96FT9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IFT43Q96FT9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.46■□□□□ 0.87
IFT43Q96FT9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.46■□□□□ 0.87
IFT43Q96FT9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
IFT43Q96FT9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
IFT43Q96FT9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IFT43Q96FT9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
IFT43Q96FT9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
IFT43Q96FT9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IFT43Q96FT9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IFT43Q96FT9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.46■□□□□ 0.87
IFT43Q96FT9 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.46■□□□□ 0.87
IFT43Q96FT9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.46■□□□□ 0.87
IFT43Q96FT9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.46■□□□□ 0.87
IFT43Q96FT9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.46■□□□□ 0.87
IFT43Q96FT9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IFT43Q96FT9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
IFT43Q96FT9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IFT43Q96FT9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IFT43Q96FT9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
IFT43Q96FT9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IFT43Q96FT9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IFT43Q96FT9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.46■□□□□ 0.87
IFT43Q96FT9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IFT43Q96FT9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.46■□□□□ 0.87
IFT43Q96FT9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
IFT43Q96FT9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
IFT43Q96FT9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IFT43Q96FT9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IFT43Q96FT9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IFT43Q96FT9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
IFT43Q96FT9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IFT43Q96FT9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.45■□□□□ 0.86
IFT43Q96FT9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
IFT43Q96FT9 KRT17P1-201ENST00000399211 1546 ntBASIC20.45■□□□□ 0.86
IFT43Q96FT9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IFT43Q96FT9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.45■□□□□ 0.86
IFT43Q96FT9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IFT43Q96FT9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms