Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 AP002982.1-201ENST00000492365 877 ntBASIC20.04■□□□□ 0.8
SIPA1Q96FS4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.03■□□□□ 0.8
SIPA1Q96FS4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIPA1Q96FS4 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.03■□□□□ 0.8
SIPA1Q96FS4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SIPA1Q96FS4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SIPA1Q96FS4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIPA1Q96FS4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIPA1Q96FS4 KRT18P21-201ENST00000515767 1272 ntBASIC20.03■□□□□ 0.8
SIPA1Q96FS4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SIPA1Q96FS4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.03■□□□□ 0.8
SIPA1Q96FS4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.03■□□□□ 0.8
SIPA1Q96FS4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
SIPA1Q96FS4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SIPA1Q96FS4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 MIR1224-201ENST00000408193 85 ntBASIC20.02■□□□□ 0.8
SIPA1Q96FS4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.02■□□□□ 0.8
SIPA1Q96FS4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SIPA1Q96FS4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.02■□□□□ 0.79
SIPA1Q96FS4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.02■□□□□ 0.79
SIPA1Q96FS4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIPA1Q96FS4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20■□□□□ 0.79
SIPA1Q96FS4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SIPA1Q96FS4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIPA1Q96FS4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIPA1Q96FS4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20■□□□□ 0.79
SIPA1Q96FS4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SIPA1Q96FS4 AL353708.3-201ENST00000610272 989 ntBASIC20■□□□□ 0.79
SIPA1Q96FS4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20■□□□□ 0.79
SIPA1Q96FS4 AC097493.4-201ENST00000641197 219 ntBASIC20■□□□□ 0.79
SIPA1Q96FS4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20■□□□□ 0.79
SIPA1Q96FS4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20■□□□□ 0.79
SIPA1Q96FS4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20■□□□□ 0.79
SIPA1Q96FS4 AC005229.4-201ENST00000610085 2198 ntBASIC20■□□□□ 0.79
SIPA1Q96FS4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIPA1Q96FS4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIPA1Q96FS4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SIPA1Q96FS4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIPA1Q96FS4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIPA1Q96FS4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIPA1Q96FS4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIPA1Q96FS4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIPA1Q96FS4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SIPA1Q96FS4 MMP23A-201ENST00000234610 1017 ntBASIC19.99■□□□□ 0.79
SIPA1Q96FS4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIPA1Q96FS4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms