Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SMARCC1Q92922 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMARCC1Q92922 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
SMARCC1Q92922 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC25.61■■□□□ 1.69
SMARCC1Q92922 CRYGFP-201ENST00000418459 633 ntBASIC25.61■■□□□ 1.69
SMARCC1Q92922 AC004980.1-204ENST00000429707 299 ntBASIC25.61■■□□□ 1.69
SMARCC1Q92922 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.61■■□□□ 1.69
SMARCC1Q92922 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.61■■□□□ 1.69
SMARCC1Q92922 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC25.6■■□□□ 1.69
SMARCC1Q92922 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC1Q92922 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC1Q92922 AK4P3-201ENST00000418260 669 ntBASIC25.6■■□□□ 1.69
SMARCC1Q92922 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC25.6■■□□□ 1.69
SMARCC1Q92922 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC25.6■■□□□ 1.69
SMARCC1Q92922 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC25.6■■□□□ 1.69
SMARCC1Q92922 LINC01238-205ENST00000567549 1107 ntBASIC25.6■■□□□ 1.69
SMARCC1Q92922 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC25.6■■□□□ 1.69
SMARCC1Q92922 AC131212.4-201ENST00000623606 975 ntBASIC25.6■■□□□ 1.69
SMARCC1Q92922 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC1Q92922 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC1Q92922 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMARCC1Q92922 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMARCC1Q92922 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMARCC1Q92922 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SMARCC1Q92922 GUK1-204ENST00000366721 689 ntTSL 3 BASIC25.59■■□□□ 1.69
SMARCC1Q92922 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SMARCC1Q92922 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC25.59■■□□□ 1.69
SMARCC1Q92922 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC25.59■■□□□ 1.69
SMARCC1Q92922 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC25.59■■□□□ 1.69
SMARCC1Q92922 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SMARCC1Q92922 FAM87A-204ENST00000613235 858 ntBASIC25.59■■□□□ 1.69
SMARCC1Q92922 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMARCC1Q92922 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC25.59■■□□□ 1.69
SMARCC1Q92922 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.59■■□□□ 1.69
SMARCC1Q92922 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMARCC1Q92922 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SMARCC1Q92922 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMARCC1Q92922 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC25.59■■□□□ 1.69
SMARCC1Q92922 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMARCC1Q92922 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.59■■□□□ 1.69
SMARCC1Q92922 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMARCC1Q92922 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SMARCC1Q92922 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SMARCC1Q92922 YBX1P10-201ENST00000444752 975 ntBASIC25.58■■□□□ 1.69
SMARCC1Q92922 AC063952.2-201ENST00000498792 1227 ntBASIC25.58■■□□□ 1.69
SMARCC1Q92922 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC25.58■■□□□ 1.69
SMARCC1Q92922 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC25.58■■□□□ 1.69
SMARCC1Q92922 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC25.58■■□□□ 1.69
SMARCC1Q92922 AL049796.1-201ENST00000565336 1766 ntBASIC25.58■■□□□ 1.69
SMARCC1Q92922 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC25.58■■□□□ 1.69
SMARCC1Q92922 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.58■■□□□ 1.68
SMARCC1Q92922 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SMARCC1Q92922 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC1Q92922 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.57■■□□□ 1.68
SMARCC1Q92922 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.57■■□□□ 1.68
SMARCC1Q92922 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC1Q92922 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC1Q92922 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC25.57■■□□□ 1.68
SMARCC1Q92922 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC1Q92922 AC022616.7-201ENST00000525383 220 ntBASIC25.57■■□□□ 1.68
SMARCC1Q92922 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC25.57■■□□□ 1.68
SMARCC1Q92922 Z98882.1-201ENST00000622160 2253 ntBASIC25.57■■□□□ 1.68
SMARCC1Q92922 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC1Q92922 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCC1Q92922 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCC1Q92922 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCC1Q92922 AC116351.2-201ENST00000606540 1585 ntBASIC25.56■■□□□ 1.68
SMARCC1Q92922 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.56■■□□□ 1.68
SMARCC1Q92922 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCC1Q92922 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCC1Q92922 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.56■■□□□ 1.68
SMARCC1Q92922 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCC1Q92922 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCC1Q92922 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCC1Q92922 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC25.56■■□□□ 1.68
SMARCC1Q92922 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC25.56■■□□□ 1.68
SMARCC1Q92922 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCC1Q92922 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC25.56■■□□□ 1.68
SMARCC1Q92922 KRT18P16-201ENST00000510337 1294 ntBASIC25.56■■□□□ 1.68
SMARCC1Q92922 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC25.56■■□□□ 1.68
SMARCC1Q92922 AC091076.1-201ENST00000610741 619 ntBASIC25.56■■□□□ 1.68
SMARCC1Q92922 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
SMARCC1Q92922 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCC1Q92922 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCC1Q92922 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.55■■□□□ 1.68
SMARCC1Q92922 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
SMARCC1Q92922 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCC1Q92922 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCC1Q92922 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCC1Q92922 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.55■■□□□ 1.68
SMARCC1Q92922 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC25.55■■□□□ 1.68
SMARCC1Q92922 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
SMARCC1Q92922 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SMARCC1Q92922 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.55■■□□□ 1.68
SMARCC1Q92922 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SMARCC1Q92922 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
SMARCC1Q92922 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SMARCC1Q92922 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.54■■□□□ 1.68
SMARCC1Q92922 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
SMARCC1Q92922 TFP1-202ENST00000475455 1573 ntBASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms