Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.36■□□□□ 0.53
CNOT9Q92600 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.36■□□□□ 0.53
CNOT9Q92600 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.35■□□□□ 0.53
CNOT9Q92600 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 AC006970.2-201ENST00000450065 779 ntBASIC18.35■□□□□ 0.53
CNOT9Q92600 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.35■□□□□ 0.53
CNOT9Q92600 AC083906.2-201ENST00000511578 360 ntBASIC18.35■□□□□ 0.53
CNOT9Q92600 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.35■□□□□ 0.53
CNOT9Q92600 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.35■□□□□ 0.53
CNOT9Q92600 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 AL031963.3-201ENST00000606441 850 ntBASIC18.35■□□□□ 0.53
CNOT9Q92600 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.35■□□□□ 0.53
CNOT9Q92600 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CNOT9Q92600 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT9Q92600 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.34■□□□□ 0.53
CNOT9Q92600 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.34■□□□□ 0.53
CNOT9Q92600 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT9Q92600 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT9Q92600 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.34■□□□□ 0.53
CNOT9Q92600 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.34■□□□□ 0.53
CNOT9Q92600 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT9Q92600 AC092666.2-201ENST00000613287 246 ntBASIC18.34■□□□□ 0.53
CNOT9Q92600 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.34■□□□□ 0.53
CNOT9Q92600 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT9Q92600 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT9Q92600 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT9Q92600 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT9Q92600 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.33■□□□□ 0.53
CNOT9Q92600 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT9Q92600 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT9Q92600 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT9Q92600 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CNOT9Q92600 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.33■□□□□ 0.52
CNOT9Q92600 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT9Q92600 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT9Q92600 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT9Q92600 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.33■□□□□ 0.52
CNOT9Q92600 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.33■□□□□ 0.52
CNOT9Q92600 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.33■□□□□ 0.52
CNOT9Q92600 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CNOT9Q92600 AL121832.2-201ENST00000610979 668 ntBASIC18.33■□□□□ 0.52
CNOT9Q92600 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT9Q92600 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT9Q92600 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT9Q92600 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT9Q92600 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT9Q92600 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
CNOT9Q92600 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT9Q92600 AC125437.2-201ENST00000625180 2167 ntBASIC18.32■□□□□ 0.52
CNOT9Q92600 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT9Q92600 KRT8P20-201ENST00000423953 1409 ntBASIC18.32■□□□□ 0.52
CNOT9Q92600 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT9Q92600 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT9Q92600 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT9Q92600 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT9Q92600 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT9Q92600 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.32■□□□□ 0.52
CNOT9Q92600 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.32■□□□□ 0.52
CNOT9Q92600 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.32■□□□□ 0.52
CNOT9Q92600 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.32■□□□□ 0.52
CNOT9Q92600 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.32■□□□□ 0.52
CNOT9Q92600 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.32■□□□□ 0.52
CNOT9Q92600 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CNOT9Q92600 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT9Q92600 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT9Q92600 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT9Q92600 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT9Q92600 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.31■□□□□ 0.52
CNOT9Q92600 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.31■□□□□ 0.52
CNOT9Q92600 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CNOT9Q92600 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.31■□□□□ 0.52
CNOT9Q92600 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.31■□□□□ 0.52
CNOT9Q92600 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 MIPEPP3-201ENST00000412105 444 ntBASIC18.31■□□□□ 0.52
CNOT9Q92600 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms