Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.25■□□□□ 0.99
DDX1Q92499 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
DDX1Q92499 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX1Q92499 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
DDX1Q92499 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX1Q92499 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX1Q92499 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX1Q92499 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX1Q92499 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX1Q92499 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.25■□□□□ 0.99
DDX1Q92499 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.25■□□□□ 0.99
DDX1Q92499 AC098934.4-201ENST00000564127 592 ntBASIC21.25■□□□□ 0.99
DDX1Q92499 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX1Q92499 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
DDX1Q92499 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
DDX1Q92499 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX1Q92499 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX1Q92499 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX1Q92499 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX1Q92499 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX1Q92499 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX1Q92499 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX1Q92499 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX1Q92499 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX1Q92499 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX1Q92499 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX1Q92499 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX1Q92499 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX1Q92499 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX1Q92499 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX1Q92499 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX1Q92499 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX1Q92499 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX1Q92499 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.24■□□□□ 0.99
DDX1Q92499 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.24■□□□□ 0.99
DDX1Q92499 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX1Q92499 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.24■□□□□ 0.99
DDX1Q92499 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX1Q92499 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX1Q92499 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX1Q92499 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX1Q92499 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX1Q92499 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
DDX1Q92499 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX1Q92499 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
DDX1Q92499 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX1Q92499 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.23■□□□□ 0.99
DDX1Q92499 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX1Q92499 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX1Q92499 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX1Q92499 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
DDX1Q92499 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
DDX1Q92499 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX1Q92499 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
DDX1Q92499 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX1Q92499 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
DDX1Q92499 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX1Q92499 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX1Q92499 AC092118.2-201ENST00000613495 667 ntBASIC21.23■□□□□ 0.99
DDX1Q92499 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX1Q92499 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX1Q92499 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX1Q92499 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX1Q92499 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX1Q92499 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
DDX1Q92499 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX1Q92499 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.22■□□□□ 0.99
DDX1Q92499 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX1Q92499 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX1Q92499 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX1Q92499 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX1Q92499 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.22■□□□□ 0.99
DDX1Q92499 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
DDX1Q92499 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX1Q92499 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX1Q92499 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
DDX1Q92499 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
DDX1Q92499 AL158047.1-201ENST00000445918 881 ntBASIC21.22■□□□□ 0.99
DDX1Q92499 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.22■□□□□ 0.99
DDX1Q92499 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
DDX1Q92499 AC142381.4-202ENST00000563973 229 ntBASIC21.22■□□□□ 0.99
DDX1Q92499 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX1Q92499 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.22■□□□□ 0.99
DDX1Q92499 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX1Q92499 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX1Q92499 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX1Q92499 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX1Q92499 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
DDX1Q92499 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX1Q92499 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX1Q92499 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX1Q92499 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.21■□□□□ 0.99
DDX1Q92499 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX1Q92499 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX1Q92499 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
DDX1Q92499 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX1Q92499 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.21■□□□□ 0.99
DDX1Q92499 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.21■□□□□ 0.99
DDX1Q92499 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
DDX1Q92499 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms