Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCD2Q8WV60 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 AL031963.3-201ENST00000606441 850 ntBASIC20.16■□□□□ 0.82
PTCD2Q8WV60 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 KRT8P17-201ENST00000453110 1448 ntBASIC20.16■□□□□ 0.82
PTCD2Q8WV60 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCD2Q8WV60 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 AL691432.2-201ENST00000607222 2038 ntBASIC20.15■□□□□ 0.82
PTCD2Q8WV60 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.15■□□□□ 0.82
PTCD2Q8WV60 AC244517.3-201ENST00000616254 1235 ntBASIC20.15■□□□□ 0.82
PTCD2Q8WV60 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTCD2Q8WV60 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PTCD2Q8WV60 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
PTCD2Q8WV60 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
PTCD2Q8WV60 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
PTCD2Q8WV60 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PTCD2Q8WV60 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.13■□□□□ 0.81
PTCD2Q8WV60 AFG3L1P-217ENST00000557444 2447 ntBASIC20.13■□□□□ 0.81
PTCD2Q8WV60 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 KRT8P20-201ENST00000423953 1409 ntBASIC20.13■□□□□ 0.81
PTCD2Q8WV60 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 PCDHAC2-203ENST00000615316 3011 ntBASIC20.13■□□□□ 0.81
PTCD2Q8WV60 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.13■□□□□ 0.81
PTCD2Q8WV60 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTCD2Q8WV60 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.12■□□□□ 0.81
PTCD2Q8WV60 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms