Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHKBP1Q8TBC3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHKBP1Q8TBC3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHKBP1Q8TBC3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHKBP1Q8TBC3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.95■□□□□ 0.95
SHKBP1Q8TBC3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHKBP1Q8TBC3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 PTBP1P-201ENST00000554374 1601 ntBASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 NBPF21P-201ENST00000425093 1451 ntBASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 FEM1AP4-201ENST00000443167 1987 ntBASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHKBP1Q8TBC3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 AL121906.2-201ENST00000621597 723 ntBASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHKBP1Q8TBC3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms