Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT1Q8NF37 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.12■□□□□ 0.81
LPCAT1Q8NF37 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LPCAT1Q8NF37 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LPCAT1Q8NF37 CD99P1-205ENST00000527459 561 ntBASIC20.12■□□□□ 0.81
LPCAT1Q8NF37 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.12■□□□□ 0.81
LPCAT1Q8NF37 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT1Q8NF37 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT1Q8NF37 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
LPCAT1Q8NF37 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.12■□□□□ 0.81
LPCAT1Q8NF37 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT1Q8NF37 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT1Q8NF37 KRT16P6-202ENST00000425692 1426 ntBASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 PCDHAC2-203ENST00000615316 3011 ntBASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 UNC93B5-201ENST00000530315 699 ntBASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT1Q8NF37 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.09■□□□□ 0.81
LPCAT1Q8NF37 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 AC073130.3-201ENST00000624389 2278 ntBASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
LPCAT1Q8NF37 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms