Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 AC121338.2-201ENST00000622535 1744 ntBASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 AP005242.2-201ENST00000580065 1175 ntBASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 FBXW4P1-201ENST00000426721 2239 ntBASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 AL117328.2-201ENST00000624617 1940 ntBASIC18.91■□□□□ 0.62
COL27A1Q8IZC6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 FSCN1P1-201ENST00000568912 1481 ntBASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 AC004980.1-204ENST00000429707 299 ntBASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.9■□□□□ 0.62
COL27A1Q8IZC6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
COL27A1Q8IZC6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
COL27A1Q8IZC6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
COL27A1Q8IZC6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.89■□□□□ 0.62
COL27A1Q8IZC6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.89■□□□□ 0.62
COL27A1Q8IZC6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 HLA-G-202ENST00000376815 851 ntBASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 HLA-G-203ENST00000376818 1127 ntBASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 PLK5-205ENST00000642079 1969 ntBASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 TFP1-202ENST00000475455 1573 ntBASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 AC116351.2-201ENST00000606540 1585 ntBASIC18.89■□□□□ 0.61
COL27A1Q8IZC6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 INGX-201ENST00000359239 846 ntBASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 KRT18P16-201ENST00000510337 1294 ntBASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 ARMC10P1-201ENST00000313754 855 ntBASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL27A1Q8IZC6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms