Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 AP006294.2-201ENST00000641667 209 ntBASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 AC092720.2-201ENST00000602388 1665 ntBASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM48Q8IWZ4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 RN7SL471P-201ENST00000580476 299 ntBASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM48Q8IWZ4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 DPP3P2-201ENST00000416030 1696 ntBASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 KRT8P20-201ENST00000423953 1409 ntBASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 RPPH1-201ENST00000516869 333 ntBASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM48Q8IWZ4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.52■□□□□ 0.71
TRIM48Q8IWZ4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
TRIM48Q8IWZ4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM48Q8IWZ4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
TRIM48Q8IWZ4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM48Q8IWZ4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM48Q8IWZ4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM48Q8IWZ4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM48Q8IWZ4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 AC093827.2-201ENST00000512654 315 ntBASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 AL031963.3-201ENST00000606441 850 ntBASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 AL359736.2-201ENST00000621992 437 ntBASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM48Q8IWZ4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms