Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 AL121906.2-201ENST00000621597 723 ntBASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN4BQ8IWT1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN4BQ8IWT1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 MIR718-201ENST00000390190 70 ntBASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 Z99916.2-201ENST00000604037 246 ntBASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN4BQ8IWT1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCN4BQ8IWT1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.02■□□□□ 0.95
SCN4BQ8IWT1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCN4BQ8IWT1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 AL596275.1-201ENST00000423464 877 ntBASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN4BQ8IWT1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN4BQ8IWT1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SCN4BQ8IWT1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN4BQ8IWT1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SCN4BQ8IWT1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCN4BQ8IWT1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21■□□□□ 0.95
SCN4BQ8IWT1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21■□□□□ 0.95
SCN4BQ8IWT1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21■□□□□ 0.95
SCN4BQ8IWT1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCN4BQ8IWT1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21■□□□□ 0.95
SCN4BQ8IWT1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21■□□□□ 0.95
SCN4BQ8IWT1 KRT16P6-202ENST00000425692 1426 ntBASIC21■□□□□ 0.95
SCN4BQ8IWT1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SCN4BQ8IWT1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN4BQ8IWT1 NBPF21P-201ENST00000425093 1451 ntBASIC21■□□□□ 0.95
SCN4BQ8IWT1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21■□□□□ 0.95
SCN4BQ8IWT1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms