Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
NUDCD3Q8IVD9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
NUDCD3Q8IVD9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.77■□□□□ 0.75
NUDCD3Q8IVD9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
NUDCD3Q8IVD9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.77■□□□□ 0.75
NUDCD3Q8IVD9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 SUDS3P1-201ENST00000505831 966 ntBASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUDCD3Q8IVD9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD3Q8IVD9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD3Q8IVD9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms