Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
COL23A1Q86Y22 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
COL23A1Q86Y22 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL23A1Q86Y22 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC25.19■■□□□ 1.62
COL23A1Q86Y22 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
COL23A1Q86Y22 PP7080-204ENST00000510714 601 ntTSL 3 BASIC25.19■■□□□ 1.62
COL23A1Q86Y22 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
COL23A1Q86Y22 CLEC4GP1-201ENST00000596555 870 ntBASIC25.19■■□□□ 1.62
COL23A1Q86Y22 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL23A1Q86Y22 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.19■■□□□ 1.62
COL23A1Q86Y22 C9orf163-202ENST00000624034 2573 ntBASIC25.19■■□□□ 1.62
COL23A1Q86Y22 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL23A1Q86Y22 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL23A1Q86Y22 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.19■■□□□ 1.62
COL23A1Q86Y22 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
COL23A1Q86Y22 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
COL23A1Q86Y22 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.18■■□□□ 1.62
COL23A1Q86Y22 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.18■■□□□ 1.62
COL23A1Q86Y22 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC25.18■■□□□ 1.62
COL23A1Q86Y22 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL23A1Q86Y22 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL23A1Q86Y22 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC25.18■■□□□ 1.62
COL23A1Q86Y22 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC25.18■■□□□ 1.62
COL23A1Q86Y22 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC25.18■■□□□ 1.62
COL23A1Q86Y22 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC25.18■■□□□ 1.62
COL23A1Q86Y22 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL23A1Q86Y22 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL23A1Q86Y22 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 AP006587.1-201ENST00000534129 1502 ntBASIC25.17■■□□□ 1.62
COL23A1Q86Y22 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 AC131212.4-201ENST00000623606 975 ntBASIC25.17■■□□□ 1.62
COL23A1Q86Y22 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 AC116562.4-202ENST00000641738 218 ntBASIC25.17■■□□□ 1.62
COL23A1Q86Y22 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 KRT8P20-201ENST00000423953 1409 ntBASIC25.17■■□□□ 1.62
COL23A1Q86Y22 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL23A1Q86Y22 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 GPX4-207ENST00000589115 812 ntTSL 2 BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC25.16■■□□□ 1.62
COL23A1Q86Y22 AC141257.4-201ENST00000634557 245 ntBASIC25.16■■□□□ 1.62
COL23A1Q86Y22 AC136944.6-201ENST00000634818 245 ntBASIC25.16■■□□□ 1.62
COL23A1Q86Y22 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL23A1Q86Y22 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 HCG4P8-203ENST00000443049 980 ntBASIC25.15■■□□□ 1.62
COL23A1Q86Y22 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
COL23A1Q86Y22 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL23A1Q86Y22 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL23A1Q86Y22 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL23A1Q86Y22 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL23A1Q86Y22 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
COL23A1Q86Y22 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC25.14■■□□□ 1.62
COL23A1Q86Y22 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms