Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 KRT8P17-201ENST00000453110 1448 ntBASIC22.28■■□□□ 1.16
TRIM50Q86XT4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 HTR7P1-201ENST00000538670 1336 ntBASIC22.28■■□□□ 1.16
TRIM50Q86XT4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 KRT16P5-201ENST00000455284 522 ntBASIC22.27■■□□□ 1.16
TRIM50Q86XT4 BX088651.1-201ENST00000540551 451 ntBASIC22.27■■□□□ 1.16
TRIM50Q86XT4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 AP001412.1-201ENST00000608405 714 ntBASIC22.27■■□□□ 1.16
TRIM50Q86XT4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM50Q86XT4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
TRIM50Q86XT4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.26■■□□□ 1.15
TRIM50Q86XT4 ECEL1P3-201ENST00000427961 737 ntBASIC22.26■■□□□ 1.15
TRIM50Q86XT4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM50Q86XT4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 AF186192.3-201ENST00000583427 947 ntBASIC22.25■■□□□ 1.15
TRIM50Q86XT4 MIR4785-201ENST00000585005 73 ntBASIC22.25■■□□□ 1.15
TRIM50Q86XT4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM50Q86XT4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 AL355075.4-201ENST00000554988 638 ntBASIC22.24■■□□□ 1.15
TRIM50Q86XT4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 KRT17P2-201ENST00000300992 1314 ntBASIC22.24■■□□□ 1.15
TRIM50Q86XT4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM50Q86XT4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM50Q86XT4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM50Q86XT4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM50Q86XT4 AC211429.1-201ENST00000415277 523 ntBASIC22.23■■□□□ 1.15
TRIM50Q86XT4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.23■■□□□ 1.15
TRIM50Q86XT4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.23■■□□□ 1.15
TRIM50Q86XT4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.23■■□□□ 1.15
TRIM50Q86XT4 REXO1L12P-201ENST00000622156 912 ntBASIC22.23■■□□□ 1.15
TRIM50Q86XT4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.23■■□□□ 1.15
TRIM50Q86XT4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.23■■□□□ 1.15
TRIM50Q86XT4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM50Q86XT4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM50Q86XT4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM50Q86XT4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM50Q86XT4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM50Q86XT4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms