Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 NIFKP9-201ENST00000419265 221 ntBASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 TSPY14P-201ENST00000303979 915 ntBASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 PTBP1P-201ENST00000554374 1601 ntBASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 AC026310.3-201ENST00000625186 2373 ntBASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 AC005229.4-201ENST00000610085 2198 ntBASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 NAPSB-206ENST00000562112 1266 ntBASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 DGCR10-201ENST00000609839 495 ntBASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 FEM1AP4-201ENST00000443167 1987 ntBASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13BQ7Z7G8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 PGM5P4-201ENST00000421970 445 ntBASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 AC022616.7-201ENST00000525383 220 ntBASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 B3GAT3P1-201ENST00000471720 806 ntBASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 AL359075.1-203ENST00000462729 1002 ntBASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 AC139887.4-201ENST00000607877 719 ntBASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13BQ7Z7G8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms