Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 AP002414.4-201ENST00000589764 1148 ntBASIC10.73□□□□□ -0.69
RNF213Q63HN8 AC140113.3-201ENST00000605663 199 ntBASIC10.73□□□□□ -0.69
RNF213Q63HN8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 AC104819.1-201ENST00000504587 486 ntBASIC10.72□□□□□ -0.69
RNF213Q63HN8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RNF213Q63HN8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RNF213Q63HN8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 AL031432.5-201ENST00000641059 760 ntBASIC10.72□□□□□ -0.69
RNF213Q63HN8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RNF213Q63HN8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RNF213Q63HN8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RNF213Q63HN8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 PMS2P7-201ENST00000506558 1336 ntBASIC10.72□□□□□ -0.69
RNF213Q63HN8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RNF213Q63HN8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RNF213Q63HN8 TPSP2-201ENST00000561760 610 ntBASIC10.72□□□□□ -0.69
RNF213Q63HN8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RNF213Q63HN8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 CYMP-203ENST00000474680 1263 ntBASIC10.72□□□□□ -0.69
RNF213Q63HN8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC10.72□□□□□ -0.69
RNF213Q63HN8 AC141257.4-201ENST00000634557 245 ntBASIC10.72□□□□□ -0.69
RNF213Q63HN8 AC136944.6-201ENST00000634818 245 ntBASIC10.72□□□□□ -0.69
RNF213Q63HN8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RNF213Q63HN8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RNF213Q63HN8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RNF213Q63HN8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
RNF213Q63HN8 KSR1P1-201ENST00000446298 240 ntBASIC10.71□□□□□ -0.69
RNF213Q63HN8 AL512604.3-201ENST00000569583 964 ntBASIC10.71□□□□□ -0.69
RNF213Q63HN8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RNF213Q63HN8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RNF213Q63HN8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
RNF213Q63HN8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC10.71□□□□□ -0.69
RNF213Q63HN8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RNF213Q63HN8 GCSHP2-201ENST00000560971 527 ntBASIC10.71□□□□□ -0.69
RNF213Q63HN8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RNF213Q63HN8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC10.71□□□□□ -0.69
RNF213Q63HN8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RNF213Q63HN8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RNF213Q63HN8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
RNF213Q63HN8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RNF213Q63HN8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC10.71□□□□□ -0.69
RNF213Q63HN8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
RNF213Q63HN8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC10.71□□□□□ -0.69
RNF213Q63HN8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
RNF213Q63HN8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
RNF213Q63HN8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
RNF213Q63HN8 AC116050.2-201ENST00000612102 1779 ntBASIC10.71□□□□□ -0.69
RNF213Q63HN8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
RNF213Q63HN8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
RNF213Q63HN8 RFPL4AP1-201ENST00000530883 850 ntBASIC10.71□□□□□ -0.7
RNF213Q63HN8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
RNF213Q63HN8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.7
RNF213Q63HN8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
RNF213Q63HN8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
RNF213Q63HN8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
RNF213Q63HN8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC10.71□□□□□ -0.7
RNF213Q63HN8 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC10.71□□□□□ -0.7
RNF213Q63HN8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC10.71□□□□□ -0.7
RNF213Q63HN8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC10.71□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms