Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC25.46■■□□□ 1.67
CCDC30Q5VVM6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.46■■□□□ 1.67
CCDC30Q5VVM6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.46■■□□□ 1.67
CCDC30Q5VVM6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.46■■□□□ 1.67
CCDC30Q5VVM6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC25.46■■□□□ 1.67
CCDC30Q5VVM6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25.46■■□□□ 1.67
CCDC30Q5VVM6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CCDC30Q5VVM6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.46■■□□□ 1.67
CCDC30Q5VVM6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC30Q5VVM6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CCDC30Q5VVM6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CCDC30Q5VVM6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.45■■□□□ 1.67
CCDC30Q5VVM6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC25.45■■□□□ 1.67
CCDC30Q5VVM6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CCDC30Q5VVM6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 MME-217ENST00000616757 1315 ntTSL 5 BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 USP36-216ENST00000589424 970 ntTSL 5 BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC30Q5VVM6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 AC092667.1-201ENST00000434301 2586 ntBASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 AC093827.2-201ENST00000512654 315 ntBASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 AC116351.2-201ENST00000606540 1585 ntBASIC25.44■■□□□ 1.66
CCDC30Q5VVM6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC30Q5VVM6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC30Q5VVM6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.43■■□□□ 1.66
CCDC30Q5VVM6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC30Q5VVM6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC25.43■■□□□ 1.66
CCDC30Q5VVM6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC30Q5VVM6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC25.43■■□□□ 1.66
CCDC30Q5VVM6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC30Q5VVM6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.43■■□□□ 1.66
CCDC30Q5VVM6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC25.42■■□□□ 1.66
CCDC30Q5VVM6 NBPF21P-201ENST00000425093 1451 ntBASIC25.42■■□□□ 1.66
CCDC30Q5VVM6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC30Q5VVM6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC25.42■■□□□ 1.66
CCDC30Q5VVM6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC30Q5VVM6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC30Q5VVM6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
CCDC30Q5VVM6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.42■■□□□ 1.66
CCDC30Q5VVM6 PHGDH-210ENST00000641115 1638 ntBASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
CCDC30Q5VVM6 AC018553.1-201ENST00000616682 1458 ntBASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 AC008550.1-201ENST00000511500 884 ntBASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC30Q5VVM6 TFP1-202ENST00000475455 1573 ntBASIC25.39■■□□□ 1.66
CCDC30Q5VVM6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms