Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF20Q5VTR2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF20Q5VTR2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.8■■□□□ 1.4
RNF20Q5VTR2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.8■■□□□ 1.4
RNF20Q5VTR2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF20Q5VTR2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.8■■□□□ 1.4
RNF20Q5VTR2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF20Q5VTR2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.8■■□□□ 1.4
RNF20Q5VTR2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF20Q5VTR2 AC092118.2-201ENST00000613495 667 ntBASIC23.8■■□□□ 1.4
RNF20Q5VTR2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RNF20Q5VTR2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF20Q5VTR2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 TSPY6P-201ENST00000448518 926 ntBASIC23.79■■□□□ 1.4
RNF20Q5VTR2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.79■■□□□ 1.4
RNF20Q5VTR2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF20Q5VTR2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RNF20Q5VTR2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 GUSBP6-202ENST00000438529 1198 ntBASIC23.77■■□□□ 1.4
RNF20Q5VTR2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF20Q5VTR2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 DUSP5P2-201ENST00000426873 1033 ntBASIC23.76■■□□□ 1.39
RNF20Q5VTR2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.76■■□□□ 1.39
RNF20Q5VTR2 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.76■■□□□ 1.39
RNF20Q5VTR2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 MIR4758-201ENST00000577688 71 ntBASIC23.76■■□□□ 1.39
RNF20Q5VTR2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF20Q5VTR2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.75■■□□□ 1.39
RNF20Q5VTR2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms