Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
CCDC18Q5T9S5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC18Q5T9S5 AC079834.2-201ENST00000609776 1949 ntBASIC30.98■■■□□ 2.55
CCDC18Q5T9S5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC18Q5T9S5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC30.98■■■□□ 2.55
CCDC18Q5T9S5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC30.98■■■□□ 2.55
CCDC18Q5T9S5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC30.98■■■□□ 2.55
CCDC18Q5T9S5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC18Q5T9S5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC30.97■■■□□ 2.55
CCDC18Q5T9S5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC18Q5T9S5 MIR1238-201ENST00000408483 83 ntBASIC30.97■■■□□ 2.55
CCDC18Q5T9S5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC30.97■■■□□ 2.55
CCDC18Q5T9S5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC30.97■■■□□ 2.55
CCDC18Q5T9S5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC18Q5T9S5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
CCDC18Q5T9S5 LINC00565-201ENST00000562710 2331 ntBASIC30.97■■■□□ 2.55
CCDC18Q5T9S5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC18Q5T9S5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC18Q5T9S5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC30.96■■■□□ 2.55
CCDC18Q5T9S5 PPP1R14BP5-201ENST00000440334 435 ntBASIC30.96■■■□□ 2.55
CCDC18Q5T9S5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC30.96■■■□□ 2.55
CCDC18Q5T9S5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC18Q5T9S5 ABBA01031674.1-201ENST00000635145 728 ntBASIC30.96■■■□□ 2.55
CCDC18Q5T9S5 AC007225.1-201ENST00000566331 1836 ntBASIC30.96■■■□□ 2.55
CCDC18Q5T9S5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC30.96■■■□□ 2.55
CCDC18Q5T9S5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC30.96■■■□□ 2.55
CCDC18Q5T9S5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC18Q5T9S5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CCDC18Q5T9S5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC30.95■■■□□ 2.55
CCDC18Q5T9S5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC30.95■■■□□ 2.55
CCDC18Q5T9S5 AC092865.7-201ENST00000641832 219 ntBASIC30.95■■■□□ 2.55
CCDC18Q5T9S5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CCDC18Q5T9S5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC30.95■■■□□ 2.55
CCDC18Q5T9S5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
CCDC18Q5T9S5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CCDC18Q5T9S5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CCDC18Q5T9S5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.54
CCDC18Q5T9S5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CCDC18Q5T9S5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CCDC18Q5T9S5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC30.95■■■□□ 2.54
CCDC18Q5T9S5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC30.95■■■□□ 2.54
CCDC18Q5T9S5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
CCDC18Q5T9S5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC30.95■■■□□ 2.54
CCDC18Q5T9S5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC30.95■■■□□ 2.54
CCDC18Q5T9S5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC30.95■■■□□ 2.54
CCDC18Q5T9S5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CCDC18Q5T9S5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 AC018553.1-201ENST00000616682 1458 ntBASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 DUT-205ENST00000558813 769 ntTSL 2 BASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 AC010947.1-201ENST00000623454 693 ntBASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 AL031985.4-201ENST00000642138 673 ntBASIC30.94■■■□□ 2.54
CCDC18Q5T9S5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC18Q5T9S5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC30.93■■■□□ 2.54
CCDC18Q5T9S5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC18Q5T9S5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC18Q5T9S5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC18Q5T9S5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC18Q5T9S5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC18Q5T9S5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC18Q5T9S5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC18Q5T9S5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC18Q5T9S5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC18Q5T9S5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC18Q5T9S5 PHGDH-210ENST00000641115 1638 ntBASIC30.93■■■□□ 2.54
CCDC18Q5T9S5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC18Q5T9S5 KRT16P6-202ENST00000425692 1426 ntBASIC30.92■■■□□ 2.54
CCDC18Q5T9S5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC18Q5T9S5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC18Q5T9S5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC30.92■■■□□ 2.54
CCDC18Q5T9S5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC30.92■■■□□ 2.54
CCDC18Q5T9S5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC30.92■■■□□ 2.54
CCDC18Q5T9S5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
CCDC18Q5T9S5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
CCDC18Q5T9S5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC30.92■■■□□ 2.54
CCDC18Q5T9S5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC18Q5T9S5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC30.92■■■□□ 2.54
CCDC18Q5T9S5 CYP2D8P-201ENST00000433633 1490 ntBASIC30.91■■■□□ 2.54
CCDC18Q5T9S5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CCDC18Q5T9S5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
CCDC18Q5T9S5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC30.91■■■□□ 2.54
CCDC18Q5T9S5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
CCDC18Q5T9S5 AP005242.2-201ENST00000580065 1175 ntBASIC30.91■■■□□ 2.54
CCDC18Q5T9S5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC30.91■■■□□ 2.54
CCDC18Q5T9S5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC30.91■■■□□ 2.54
CCDC18Q5T9S5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms