Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EFNB3Q15768 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
EFNB3Q15768 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EFNB3Q15768 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EFNB3Q15768 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
EFNB3Q15768 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.02■□□□□ 0.32
EFNB3Q15768 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.02■□□□□ 0.32
EFNB3Q15768 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.02■□□□□ 0.32
EFNB3Q15768 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.02■□□□□ 0.32
EFNB3Q15768 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.02■□□□□ 0.32
EFNB3Q15768 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.02■□□□□ 0.32
EFNB3Q15768 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
EFNB3Q15768 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EFNB3Q15768 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.02■□□□□ 0.31
EFNB3Q15768 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
EFNB3Q15768 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.02■□□□□ 0.31
EFNB3Q15768 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
EFNB3Q15768 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.31
EFNB3Q15768 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.02■□□□□ 0.31
EFNB3Q15768 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
EFNB3Q15768 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EFNB3Q15768 AC124283.5-201ENST00000624661 1809 ntBASIC17.01■□□□□ 0.31
EFNB3Q15768 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EFNB3Q15768 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
EFNB3Q15768 AL596275.1-201ENST00000423464 877 ntBASIC17.01■□□□□ 0.31
EFNB3Q15768 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.01■□□□□ 0.31
EFNB3Q15768 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EFNB3Q15768 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.01■□□□□ 0.31
EFNB3Q15768 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.01■□□□□ 0.31
EFNB3Q15768 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.01■□□□□ 0.31
EFNB3Q15768 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.01■□□□□ 0.31
EFNB3Q15768 RARRES2P10-201ENST00000564312 460 ntBASIC17.01■□□□□ 0.31
EFNB3Q15768 AC233702.5-201ENST00000584107 538 ntBASIC17.01■□□□□ 0.31
EFNB3Q15768 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
EFNB3Q15768 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.01■□□□□ 0.31
EFNB3Q15768 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EFNB3Q15768 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EFNB3Q15768 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
EFNB3Q15768 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17■□□□□ 0.31
EFNB3Q15768 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17■□□□□ 0.31
EFNB3Q15768 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
EFNB3Q15768 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17■□□□□ 0.31
EFNB3Q15768 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
EFNB3Q15768 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EFNB3Q15768 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
EFNB3Q15768 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17■□□□□ 0.31
EFNB3Q15768 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
EFNB3Q15768 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17■□□□□ 0.31
EFNB3Q15768 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17■□□□□ 0.31
EFNB3Q15768 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17■□□□□ 0.31
EFNB3Q15768 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
EFNB3Q15768 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17■□□□□ 0.31
EFNB3Q15768 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17■□□□□ 0.31
EFNB3Q15768 Z99916.2-201ENST00000604037 246 ntBASIC17■□□□□ 0.31
EFNB3Q15768 AP001412.1-201ENST00000608405 714 ntBASIC17■□□□□ 0.31
EFNB3Q15768 Six3os1_6.1-201ENST00000620790 196 ntBASIC17■□□□□ 0.31
EFNB3Q15768 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EFNB3Q15768 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EFNB3Q15768 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17■□□□□ 0.31
EFNB3Q15768 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
EFNB3Q15768 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
EFNB3Q15768 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.99■□□□□ 0.31
EFNB3Q15768 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.99■□□□□ 0.31
EFNB3Q15768 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.99■□□□□ 0.31
EFNB3Q15768 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
EFNB3Q15768 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.99■□□□□ 0.31
EFNB3Q15768 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 RPS2P55-201ENST00000397318 883 ntBASIC16.99■□□□□ 0.31
EFNB3Q15768 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 AC107956.1-201ENST00000494359 873 ntBASIC16.99■□□□□ 0.31
EFNB3Q15768 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.99■□□□□ 0.31
EFNB3Q15768 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.99■□□□□ 0.31
EFNB3Q15768 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.99■□□□□ 0.31
EFNB3Q15768 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.99■□□□□ 0.31
EFNB3Q15768 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.99■□□□□ 0.31
EFNB3Q15768 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.99■□□□□ 0.31
EFNB3Q15768 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.99■□□□□ 0.31
EFNB3Q15768 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.99■□□□□ 0.31
EFNB3Q15768 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
EFNB3Q15768 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EFNB3Q15768 NBPF21P-201ENST00000425093 1451 ntBASIC16.99■□□□□ 0.31
EFNB3Q15768 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms