Protein–RNA interactions for Protein: Q08954

YPL199C, Smr domain-containing protein YPL199C, yeastyeast

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL199CQ08954 YOL014WYOL014W 375 nt0.47□□□□□ -2.33
YPL199CQ08954 snR39BsnR39B 96 nt0.47□□□□□ -2.33
YPL199CQ08954 YDL007C-AYDL007C-A 258 nt0.44□□□□□ -2.34
YPL199CQ08954 YDR210WYDR210W 228 nt0.44□□□□□ -2.34
YPL199CQ08954 MLP1YKR095W 5628 nt0.43□□□□□ -2.34
YPL199CQ08954 tM(CAU)Q2tM(CAU)Q2 78 nt0.43□□□□□ -2.34
YPL199CQ08954 YBL100W-BYBL100W-B 5313 nt0.41□□□□□ -2.34
YPL199CQ08954 RCO1YMR075W 2055 nt0.41□□□□□ -2.34
YPL199CQ08954 IQG1YPL242C 4488 nt0.4□□□□□ -2.34
YPL199CQ08954 YLR294CYLR294C 330 nt0.38□□□□□ -2.35
YPL199CQ08954 CSE1YGL238W 2883 nt0.36□□□□□ -2.35
YPL199CQ08954 YGR146C-AYGR146C-A 162 nt0.36□□□□□ -2.35
YPL199CQ08954 ESP1YGR098C 4893 nt0.36□□□□□ -2.35
YPL199CQ08954 BIR1YJR089W 2865 nt0.35□□□□□ -2.35
YPL199CQ08954 YNL067W-BYNL067W-B 141 nt0.35□□□□□ -2.35
YPL199CQ08954 AI1Q0050 2505 nt0.35□□□□□ -2.35
YPL199CQ08954 YBR099CYBR099C 384 nt0.32□□□□□ -2.36
YPL199CQ08954 FMP27YLR454W 7887 nt0.31□□□□□ -2.36
YPL199CQ08954 YOR186C-AYOR186C-A 210 nt0.28□□□□□ -2.36
YPL199CQ08954 YNL054W-BYNL054W-B 5250 nt0.27□□□□□ -2.37
YPL199CQ08954 MLP2YIL149C 5040 nt0.27□□□□□ -2.37
YPL199CQ08954 YNL205CYNL205C 423 nt0.24□□□□□ -2.37
YPL199CQ08954 YOL013W-AYOL013W-A 192 nt0.24□□□□□ -2.37
YPL199CQ08954 THO2YNL139C 4794 nt0.24□□□□□ -2.37
YPL199CQ08954 SOV1YMR066W 2697 nt0.23□□□□□ -2.37
YPL199CQ08954 EST1YLR233C 2100 nt0.22□□□□□ -2.37
YPL199CQ08954 PMP2YEL017C-A 132 nt0.22□□□□□ -2.37
YPL199CQ08954 snR69snR69 101 nt0.21□□□□□ -2.38
YPL199CQ08954 YER078W-AYER078W-A 165 nt0.21□□□□□ -2.38
YPL199CQ08954 YGR164WYGR164W 336 nt0.21□□□□□ -2.38
YPL199CQ08954 YIL071W-AYIL071W-A 477 nt0.19□□□□□ -2.38
YPL199CQ08954 YJL077W-AYJL077W-A 87 nt0.19□□□□□ -2.38
YPL199CQ08954 SOM1YEL059C-A 225 nt0.18□□□□□ -2.38
YPL199CQ08954 YCR095W-AYCR095W-A 159 nt0.17□□□□□ -2.38
YPL199CQ08954 SEC10YLR166C 2616 nt0.15□□□□□ -2.39
YPL199CQ08954 YCL001W-BYCL001W-B 255 nt0.15□□□□□ -2.39
YPL199CQ08954 YNL266WYNL266W 420 nt0.12□□□□□ -2.39
YPL199CQ08954 tD(GUC)QtD(GUC)Q 75 nt0.11□□□□□ -2.39
YPL199CQ08954 RDS3YPR094W 324 nt0.11□□□□□ -2.39
YPL199CQ08954 tQ(UUG)QtQ(UUG)Q 76 nt0.08□□□□□ -2.4
YPL199CQ08954 YBR178WYBR178W 375 nt0.07□□□□□ -2.4
YPL199CQ08954 YNL170WYNL170W 396 nt0.06□□□□□ -2.4
YPL199CQ08954 ATP8Q0080 147 nt0.04□□□□□ -2.4
YPL199CQ08954 snR45snR45 172 nt0.03□□□□□ -2.4
YPL199CQ08954 YER090C-AYER090C-A 90 nt0.02□□□□□ -2.41
YPL199CQ08954 snR128snR128 126 nt0.02□□□□□ -2.41
YPL199CQ08954 YBR196C-AYBR196C-A 150 nt0.02□□□□□ -2.41
YPL199CQ08954 YLR286W-AYLR286W-A 135 nt0□□□□□ -2.41
YPL199CQ08954 YDL159C-BYDL159C-B 177 nt-0.01□□□□□ -2.41
YPL199CQ08954 snR50snR50 90 nt-0.02□□□□□ -2.41
YPL199CQ08954 YML100W-AYML100W-A 174 nt-0.04□□□□□ -2.42
YPL199CQ08954 Q0092Q0092 141 nt-0.06□□□□□ -2.42
YPL199CQ08954 YLR299C-AYLR299C-A 93 nt-0.08□□□□□ -2.42
YPL199CQ08954 TFB5YDR079C-A 219 nt-0.12□□□□□ -2.43
YPL199CQ08954 snR67snR67 82 nt-0.18□□□□□ -2.44
YPL199CQ08954 YAL037C-AYAL037C-A 93 nt-0.22□□□□□ -2.44
YPL199CQ08954 YBL071C-BYBL071C-B 99 nt-0.22□□□□□ -2.44
YPL199CQ08954 YOL083C-AYOL083C-A 141 nt-0.22□□□□□ -2.44
YPL199CQ08954 YML054C-AYML054C-A 159 nt-0.23□□□□□ -2.45
YPL199CQ08954 YNL103W-AYNL103W-A 90 nt-0.23□□□□□ -2.45
YPL199CQ08954 snR81snR81 201 nt-0.24□□□□□ -2.45
YPL199CQ08954 SBH2YER019C-A 267 nt-0.25□□□□□ -2.45
YPL199CQ08954 snR61snR61 90 nt-0.27□□□□□ -2.45
YPL199CQ08954 tA(UGC)QtA(UGC)Q 76 nt-0.28□□□□□ -2.45
YPL199CQ08954 SKI7YOR076C 2244 nt-0.29□□□□□ -2.46
YPL199CQ08954 YHR180C-BYHR180C-B 105 nt-0.3□□□□□ -2.46
YPL199CQ08954 PAU9YBL108C-A 129 nt-0.3□□□□□ -2.46
YPL199CQ08954 YOL164W-AYOL164W-A 183 nt-0.32□□□□□ -2.46
YPL199CQ08954 YGL041C-BYGL041C-B 183 nt-0.33□□□□□ -2.46
YPL199CQ08954 Q0143Q0143 153 nt-0.33□□□□□ -2.46
YPL199CQ08954 YBR109W-AYBR109W-A 225 nt-0.42□□□□□ -2.48
YPL199CQ08954 YJL113WYJL113W 4647 nt-0.43□□□□□ -2.48
YPL199CQ08954 YGR240C-AYGR240C-A 201 nt-0.45□□□□□ -2.48
YPL199CQ08954 YBL100W-CYBL100W-C 120 nt-0.45□□□□□ -2.48
YPL199CQ08954 snR47snR47 99 nt-0.45□□□□□ -2.48
YPL199CQ08954 YBR296C-AYBR296C-A 120 nt-0.46□□□□□ -2.48
YPL199CQ08954 URB1YKL014C 5295 nt-0.46□□□□□ -2.48
YPL199CQ08954 RPL41AYDL184C 78 nt-0.47□□□□□ -2.48
YPL199CQ08954 snR38snR38 95 nt-0.49□□□□□ -2.49
YPL199CQ08954 snR85snR85 171 nt-0.53□□□□□ -2.49
YPL199CQ08954 tS(GCU)Q1tS(GCU)Q1 86 nt-0.55□□□□□ -2.5
YPL199CQ08954 YHL009W-BYHL009W-B 5409 nt-0.57□□□□□ -2.5
YPL199CQ08954 snR62snR62 100 nt-0.58□□□□□ -2.5
YPL199CQ08954 YMR326CYMR326C 309 nt-0.59□□□□□ -2.5
YPL199CQ08954 snR161snR161 161 nt-0.61□□□□□ -2.51
YPL199CQ08954 YHR217CYHR217C 462 nt-0.62□□□□□ -2.51
YPL199CQ08954 YOR376W-AYOR376W-A 156 nt-0.62□□□□□ -2.51
YPL199CQ08954 YDR034C-AYDR034C-A 177 nt-0.63□□□□□ -2.51
YPL199CQ08954 YKL106C-AYKL106C-A 120 nt-0.66□□□□□ -2.52
YPL199CQ08954 tT(UGU)G1tT(UGU)G1 72 nt-0.67□□□□□ -2.52
YPL199CQ08954 tT(UGU)G2tT(UGU)G2 72 nt-0.67□□□□□ -2.52
YPL199CQ08954 tT(UGU)PtT(UGU)P 72 nt-0.67□□□□□ -2.52
YPL199CQ08954 YBL109WYBL109W 336 nt-0.67□□□□□ -2.52
YPL199CQ08954 YKL225WYKL225W 348 nt-0.68□□□□□ -2.52
YPL199CQ08954 YNR077CYNR077C 255 nt-0.7□□□□□ -2.52
YPL199CQ08954 snR33snR33 183 nt-0.71□□□□□ -2.52
YPL199CQ08954 YOR316C-AYOR316C-A 210 nt-0.76□□□□□ -2.53
YPL199CQ08954 YBR223W-AYBR223W-A 120 nt-0.82□□□□□ -2.54
YPL199CQ08954 YDR524C-AYDR524C-A 120 nt-0.84□□□□□ -2.54
YPL199CQ08954 YLL066W-BYLL066W-B 171 nt-0.87□□□□□ -2.55
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms