Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.23■□□□□ 0.67
PCDH1Q08174 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDH1Q08174 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH1Q08174 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH1Q08174 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
PCDH1Q08174 TSPY6P-201ENST00000448518 926 ntBASIC19.23■□□□□ 0.67
PCDH1Q08174 AC006970.2-201ENST00000450065 779 ntBASIC19.23■□□□□ 0.67
PCDH1Q08174 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDH1Q08174 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH1Q08174 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH1Q08174 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PCDH1Q08174 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH1Q08174 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCDH1Q08174 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
PCDH1Q08174 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.22■□□□□ 0.67
PCDH1Q08174 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDH1Q08174 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH1Q08174 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PCDH1Q08174 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.22■□□□□ 0.67
PCDH1Q08174 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.22■□□□□ 0.67
PCDH1Q08174 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDH1Q08174 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDH1Q08174 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH1Q08174 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH1Q08174 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH1Q08174 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH1Q08174 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH1Q08174 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH1Q08174 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH1Q08174 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH1Q08174 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH1Q08174 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH1Q08174 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDH1Q08174 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH1Q08174 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH1Q08174 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH1Q08174 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH1Q08174 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH1Q08174 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
PCDH1Q08174 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH1Q08174 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH1Q08174 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
PCDH1Q08174 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH1Q08174 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH1Q08174 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH1Q08174 AC125437.2-201ENST00000625180 2167 ntBASIC19.2■□□□□ 0.66
PCDH1Q08174 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH1Q08174 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH1Q08174 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH1Q08174 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH1Q08174 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH1Q08174 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH1Q08174 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PCDH1Q08174 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDH1Q08174 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCDH1Q08174 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH1Q08174 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH1Q08174 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PCDH1Q08174 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH1Q08174 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH1Q08174 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH1Q08174 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH1Q08174 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDH1Q08174 AP001271.2-201ENST00000624018 1556 ntBASIC19.19■□□□□ 0.66
PCDH1Q08174 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH1Q08174 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PCDH1Q08174 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH1Q08174 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH1Q08174 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH1Q08174 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH1Q08174 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH1Q08174 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH1Q08174 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDH1Q08174 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH1Q08174 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH1Q08174 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH1Q08174 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH1Q08174 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH1Q08174 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms