Protein–RNA interactions for Protein: Q06629

HDA2, HDA1 complex subunit 2, yeastyeast

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA2Q06629 SPC110YDR356W 2835 nt1.45□□□□□ -2.18
HDA2Q06629 CCH1YGR217W 6120 nt1.43□□□□□ -2.18
HDA2Q06629 RDS3YPR094W 324 nt1.43□□□□□ -2.18
HDA2Q06629 CAT8YMR280C 4302 nt1.43□□□□□ -2.18
HDA2Q06629 NIP1YMR309C 2439 nt1.42□□□□□ -2.18
HDA2Q06629 PET111YMR257C 2403 nt1.41□□□□□ -2.18
HDA2Q06629 HUG1YML058W-A 207 nt1.4□□□□□ -2.19
HDA2Q06629 MSH3YCR092C 3057 nt1.39□□□□□ -2.19
HDA2Q06629 BUD3YCL014W 4911 nt1.39□□□□□ -2.19
HDA2Q06629 ULP2YIL031W 3105 nt1.38□□□□□ -2.19
HDA2Q06629 FYV8YGR196C 2454 nt1.38□□□□□ -2.19
HDA2Q06629 PAU12YGR294W 363 nt1.37□□□□□ -2.19
HDA2Q06629 HKR1YDR420W 5409 nt1.36□□□□□ -2.19
HDA2Q06629 YNL284C-BYNL284C-B 5268 nt1.34□□□□□ -2.19
HDA2Q06629 tQ(UUG)QtQ(UUG)Q 76 nt1.33□□□□□ -2.2
HDA2Q06629 LAA1YJL207C 6045 nt1.33□□□□□ -2.2
HDA2Q06629 SPT7YBR081C 3999 nt1.32□□□□□ -2.2
HDA2Q06629 tQ(UUG)E2tQ(UUG)E2 72 nt1.31□□□□□ -2.2
HDA2Q06629 YGR130CYGR130C 2451 nt1.3□□□□□ -2.2
HDA2Q06629 SIP4YJL089W 2490 nt1.29□□□□□ -2.2
HDA2Q06629 BUL2YML111W 2763 nt1.29□□□□□ -2.2
HDA2Q06629 YNL054W-BYNL054W-B 5250 nt1.28□□□□□ -2.2
HDA2Q06629 YLL006W-AYLL006W-A 177 nt1.27□□□□□ -2.21
HDA2Q06629 YOR192C-BYOR192C-B 5313 nt1.27□□□□□ -2.21
HDA2Q06629 YJL077W-AYJL077W-A 87 nt1.23□□□□□ -2.21
HDA2Q06629 YJR029WYJR029W 5268 nt1.21□□□□□ -2.22
HDA2Q06629 YPR137C-BYPR137C-B 5268 nt1.21□□□□□ -2.22
HDA2Q06629 tH(GUG)E1tH(GUG)E1 72 nt1.2□□□□□ -2.22
HDA2Q06629 tH(GUG)E2tH(GUG)E2 72 nt1.2□□□□□ -2.22
HDA2Q06629 tH(GUG)G1tH(GUG)G1 72 nt1.2□□□□□ -2.22
HDA2Q06629 tH(GUG)G2tH(GUG)G2 72 nt1.2□□□□□ -2.22
HDA2Q06629 tH(GUG)HtH(GUG)H 72 nt1.2□□□□□ -2.22
HDA2Q06629 tH(GUG)KtH(GUG)K 72 nt1.2□□□□□ -2.22
HDA2Q06629 tH(GUG)MtH(GUG)M 72 nt1.2□□□□□ -2.22
HDA2Q06629 YPL060C-AYPL060C-A 3315 nt1.18□□□□□ -2.22
HDA2Q06629 NST1YNL091W 3723 nt1.17□□□□□ -2.22
HDA2Q06629 SCC2YDR180W 4482 nt1.17□□□□□ -2.22
HDA2Q06629 YER090C-AYER090C-A 90 nt1.16□□□□□ -2.22
HDA2Q06629 IML1YJR138W 4755 nt1.15□□□□□ -2.22
HDA2Q06629 RKR1YMR247C 4689 nt1.15□□□□□ -2.23
HDA2Q06629 MLP2YIL149C 5040 nt1.11□□□□□ -2.23
HDA2Q06629 YDL114W-AYDL114W-A 114 nt1.1□□□□□ -2.23
HDA2Q06629 YPR117WYPR117W 7470 nt1.1□□□□□ -2.23
HDA2Q06629 LTE1YAL024C 4308 nt1.09□□□□□ -2.23
HDA2Q06629 tV(UAC)BtV(UAC)B 74 nt1.09□□□□□ -2.23
HDA2Q06629 tV(UAC)DtV(UAC)D 74 nt1.09□□□□□ -2.23
HDA2Q06629 YOR376W-AYOR376W-A 156 nt1.08□□□□□ -2.24
HDA2Q06629 snR67snR67 82 nt1.07□□□□□ -2.24
HDA2Q06629 THO2YNL139C 4794 nt1.07□□□□□ -2.24
HDA2Q06629 VAM6YDL077C 3150 nt1.05□□□□□ -2.24
HDA2Q06629 YKL106C-AYKL106C-A 120 nt1.03□□□□□ -2.24
HDA2Q06629 tV(UAC)QtV(UAC)Q 76 nt1□□□□□ -2.25
HDA2Q06629 snR40snR40 97 nt0.97□□□□□ -2.25
HDA2Q06629 YMR160WYMR160W 2451 nt0.97□□□□□ -2.25
HDA2Q06629 PAU24YBR301W 363 nt0.96□□□□□ -2.26
HDA2Q06629 EMT1tM(CAU)D 73 nt0.93□□□□□ -2.26
HDA2Q06629 EMT5tM(CAU)J1 73 nt0.93□□□□□ -2.26
HDA2Q06629 EMT3tM(CAU)J2 73 nt0.93□□□□□ -2.26
HDA2Q06629 EMT4tM(CAU)M 73 nt0.93□□□□□ -2.26
HDA2Q06629 EMT2tM(CAU)O2 73 nt0.93□□□□□ -2.26
HDA2Q06629 MLP1YKR095W 5628 nt0.89□□□□□ -2.27
HDA2Q06629 BEM2YER155C 6504 nt0.89□□□□□ -2.27
HDA2Q06629 DOP1YDR141C 5097 nt0.89□□□□□ -2.27
HDA2Q06629 tF(GAA)BtF(GAA)B 73 nt0.85□□□□□ -2.27
HDA2Q06629 tF(GAA)FtF(GAA)F 73 nt0.85□□□□□ -2.27
HDA2Q06629 tF(GAA)GtF(GAA)G 73 nt0.85□□□□□ -2.27
HDA2Q06629 tF(GAA)H1tF(GAA)H1 73 nt0.85□□□□□ -2.27
HDA2Q06629 tF(GAA)H2tF(GAA)H2 73 nt0.85□□□□□ -2.27
HDA2Q06629 tF(GAA)MtF(GAA)M 73 nt0.85□□□□□ -2.27
HDA2Q06629 tF(GAA)P1tF(GAA)P1 73 nt0.85□□□□□ -2.27
HDA2Q06629 tF(GAA)P2tF(GAA)P2 73 nt0.85□□□□□ -2.27
HDA2Q06629 UTP20YBL004W 7482 nt0.78□□□□□ -2.28
HDA2Q06629 snR77snR77 88 nt0.76□□□□□ -2.29
HDA2Q06629 YPR159C-AYPR159C-A 102 nt0.76□□□□□ -2.29
HDA2Q06629 YBL100W-BYBL100W-B 5313 nt0.75□□□□□ -2.29
HDA2Q06629 IQG1YPL242C 4488 nt0.72□□□□□ -2.29
HDA2Q06629 YOL014WYOL014W 375 nt0.7□□□□□ -2.3
HDA2Q06629 YOR186C-AYOR186C-A 210 nt0.7□□□□□ -2.3
HDA2Q06629 YOR316C-AYOR316C-A 210 nt0.68□□□□□ -2.3
HDA2Q06629 YML100W-AYML100W-A 174 nt0.67□□□□□ -2.3
HDA2Q06629 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
HDA2Q06629 SBH2YER019C-A 267 nt0.65□□□□□ -2.31
HDA2Q06629 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
HDA2Q06629 YKL145W-AYKL145W-A 93 nt0.64□□□□□ -2.31
HDA2Q06629 tT(AGU)BtT(AGU)B 73 nt0.63□□□□□ -2.31
HDA2Q06629 tT(AGU)CtT(AGU)C 73 nt0.63□□□□□ -2.31
HDA2Q06629 tT(AGU)DtT(AGU)D 73 nt0.63□□□□□ -2.31
HDA2Q06629 tT(AGU)HtT(AGU)H 73 nt0.63□□□□□ -2.31
HDA2Q06629 tT(AGU)I1tT(AGU)I1 73 nt0.63□□□□□ -2.31
HDA2Q06629 tT(AGU)I2tT(AGU)I2 73 nt0.63□□□□□ -2.31
HDA2Q06629 tT(AGU)JtT(AGU)J 73 nt0.63□□□□□ -2.31
HDA2Q06629 tT(AGU)N1tT(AGU)N1 73 nt0.63□□□□□ -2.31
HDA2Q06629 tT(AGU)N2tT(AGU)N2 73 nt0.63□□□□□ -2.31
HDA2Q06629 tT(AGU)O1tT(AGU)O1 73 nt0.63□□□□□ -2.31
HDA2Q06629 tT(AGU)O2tT(AGU)O2 73 nt0.63□□□□□ -2.31
HDA2Q06629 SOV1YMR066W 2697 nt0.63□□□□□ -2.31
HDA2Q06629 PAU9YBL108C-A 129 nt0.57□□□□□ -2.32
HDA2Q06629 FMP27YLR454W 7887 nt0.5□□□□□ -2.33
HDA2Q06629 ESP1YGR098C 4893 nt0.47□□□□□ -2.33
HDA2Q06629 snR128snR128 126 nt0.43□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms