Protein–RNA interactions for Protein: Q06336

GGA1, ADP-ribosylation factor-binding protein GGA1, yeastyeast

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GGA1Q06336 YNR077CYNR077C 255 nt-1.04□□□□□ -2.58
GGA1Q06336 snR50snR50 90 nt-1.04□□□□□ -2.58
GGA1Q06336 YDL240C-AYDL240C-A 138 nt-1.05□□□□□ -2.58
GGA1Q06336 VAR1Q0140 1197 nt-1.05□□□□□ -2.58
GGA1Q06336 RDS3YPR094W 324 nt-1.05□□□□□ -2.58
GGA1Q06336 tF(GAA)QtF(GAA)Q 75 nt-1.06□□□□□ -2.58
GGA1Q06336 YBR131C-AYBR131C-A 90 nt-1.07□□□□□ -2.58
GGA1Q06336 tP(UGG)QtP(UGG)Q 72 nt-1.08□□□□□ -2.58
GGA1Q06336 PMP2YEL017C-A 132 nt-1.09□□□□□ -2.58
GGA1Q06336 YFL019CYFL019C 354 nt-1.09□□□□□ -2.58
GGA1Q06336 YGR146C-AYGR146C-A 162 nt-1.09□□□□□ -2.58
GGA1Q06336 JLP2YMR132C 627 nt-1.09□□□□□ -2.58
GGA1Q06336 snR39BsnR39B 96 nt-1.09□□□□□ -2.58
GGA1Q06336 YKL118WYKL118W 312 nt-1.1□□□□□ -2.59
GGA1Q06336 YER181CYER181C 324 nt-1.11□□□□□ -2.59
GGA1Q06336 YNL277W-AYNL277W-A 189 nt-1.11□□□□□ -2.59
GGA1Q06336 snR55snR55 98 nt-1.17□□□□□ -2.6
GGA1Q06336 YPR012WYPR012W 255 nt-1.17□□□□□ -2.6
GGA1Q06336 YOR329W-AYOR329W-A 210 nt-1.18□□□□□ -2.6
GGA1Q06336 GIM4YEL003W 336 nt-1.19□□□□□ -2.6
GGA1Q06336 snR67snR67 82 nt-1.21□□□□□ -2.6
GGA1Q06336 tD(GUC)QtD(GUC)Q 75 nt-1.22□□□□□ -2.6
GGA1Q06336 SKI7YOR076C 2244 nt-1.23□□□□□ -2.61
GGA1Q06336 YLR286W-AYLR286W-A 135 nt-1.26□□□□□ -2.61
GGA1Q06336 YNL097C-BYNL097C-B 123 nt-1.26□□□□□ -2.61
GGA1Q06336 YBR178WYBR178W 375 nt-1.29□□□□□ -2.62
GGA1Q06336 YDL159C-BYDL159C-B 177 nt-1.33□□□□□ -2.62
GGA1Q06336 YNL205CYNL205C 423 nt-1.33□□□□□ -2.62
GGA1Q06336 YOL155W-AYOL155W-A 135 nt-1.33□□□□□ -2.62
GGA1Q06336 Q0144Q0144 330 nt-1.36□□□□□ -2.63
GGA1Q06336 YOR302WYOR302W 78 nt-1.37□□□□□ -2.63
GGA1Q06336 snR48snR48 113 nt-1.39□□□□□ -2.63
GGA1Q06336 YML054C-AYML054C-A 159 nt-1.4□□□□□ -2.63
GGA1Q06336 CDC65tQ(CUG)M 72 nt-1.41□□□□□ -2.64
GGA1Q06336 tY(GUA)QtY(GUA)Q 84 nt-1.42□□□□□ -2.64
GGA1Q06336 snR65snR65 100 nt-1.43□□□□□ -2.64
GGA1Q06336 YPL152W-AYPL152W-A 99 nt-1.43□□□□□ -2.64
GGA1Q06336 YGL188C-AYGL188C-A 141 nt-1.44□□□□□ -2.64
GGA1Q06336 YOR102WYOR102W 351 nt-1.44□□□□□ -2.64
GGA1Q06336 snR77snR77 88 nt-1.45□□□□□ -2.64
GGA1Q06336 tL(UAA)QtL(UAA)Q 85 nt-1.46□□□□□ -2.64
GGA1Q06336 snR52snR52 92 nt-1.46□□□□□ -2.64
GGA1Q06336 YGR240C-AYGR240C-A 201 nt-1.47□□□□□ -2.64
GGA1Q06336 YLR299C-AYLR299C-A 93 nt-1.5□□□□□ -2.65
GGA1Q06336 YLR342W-AYLR342W-A 174 nt-1.5□□□□□ -2.65
GGA1Q06336 YHL015W-AYHL015W-A 84 nt-1.56□□□□□ -2.66
GGA1Q06336 YMR315W-AYMR315W-A 108 nt-1.56□□□□□ -2.66
GGA1Q06336 YBR196C-AYBR196C-A 150 nt-1.56□□□□□ -2.66
GGA1Q06336 snR81snR81 201 nt-1.57□□□□□ -2.66
GGA1Q06336 YHR175W-AYHR175W-A 150 nt-1.57□□□□□ -2.66
GGA1Q06336 YOR376W-AYOR376W-A 156 nt-1.64□□□□□ -2.67
GGA1Q06336 snR80snR80 171 nt-1.67□□□□□ -2.68
GGA1Q06336 tR(ACG)Q2tR(ACG)Q2 74 nt-1.68□□□□□ -2.68
GGA1Q06336 snR56snR56 88 nt-1.71□□□□□ -2.68
GGA1Q06336 YOR231C-AYOR231C-A 201 nt-1.71□□□□□ -2.68
GGA1Q06336 YHR180C-BYHR180C-B 105 nt-1.75□□□□□ -2.69
GGA1Q06336 YNL198CYNL198C 303 nt-1.78□□□□□ -2.69
GGA1Q06336 YBR126W-BYBR126W-B 144 nt-1.79□□□□□ -2.7
GGA1Q06336 YDR406W-AYDR406W-A 246 nt-1.83□□□□□ -2.7
GGA1Q06336 YOR309CYOR309C 381 nt-1.83□□□□□ -2.7
GGA1Q06336 YJL150WYJL150W 303 nt-1.84□□□□□ -2.7
GGA1Q06336 YOR316C-AYOR316C-A 210 nt-1.85□□□□□ -2.71
GGA1Q06336 SOM1YEL059C-A 225 nt-1.86□□□□□ -2.71
GGA1Q06336 YKL106C-AYKL106C-A 120 nt-1.87□□□□□ -2.71
GGA1Q06336 YDR524W-CYDR524W-C 90 nt-1.89□□□□□ -2.71
GGA1Q06336 YBL053WYBL053W 375 nt-1.92□□□□□ -2.72
GGA1Q06336 YCR095W-AYCR095W-A 159 nt-1.98□□□□□ -2.73
GGA1Q06336 YBR109W-AYBR109W-A 225 nt-2□□□□□ -2.73
GGA1Q06336 YDR543CYDR543C 300 nt-2.04□□□□□ -2.74
GGA1Q06336 YBR296C-AYBR296C-A 120 nt-2.05□□□□□ -2.74
GGA1Q06336 RPL41AYDL184C 78 nt-2.06□□□□□ -2.74
GGA1Q06336 snR38snR38 95 nt-2.14□□□□□ -2.75
GGA1Q06336 YGR151CYGR151C 336 nt-2.15□□□□□ -2.75
GGA1Q06336 YOL083C-AYOL083C-A 141 nt-2.16□□□□□ -2.76
GGA1Q06336 snR6snR6 112 nt-2.18□□□□□ -2.76
GGA1Q06336 YOL166W-AYOL166W-A 156 nt-2.19□□□□□ -2.76
GGA1Q06336 YBL071C-BYBL071C-B 99 nt-2.2□□□□□ -2.76
GGA1Q06336 YMR046W-AYMR046W-A 129 nt-2.21□□□□□ -2.76
GGA1Q06336 YOL164W-AYOL164W-A 183 nt-2.25□□□□□ -2.77
GGA1Q06336 Q0142Q0142 177 nt-2.26□□□□□ -2.77
GGA1Q06336 YOR335W-AYOR335W-A 81 nt-2.26□□□□□ -2.77
GGA1Q06336 snR73snR73 106 nt-2.3□□□□□ -2.78
GGA1Q06336 SPG3YDR504C 384 nt-2.32□□□□□ -2.78
GGA1Q06336 snR47snR47 99 nt-2.34□□□□□ -2.78
GGA1Q06336 YAL037C-AYAL037C-A 93 nt-2.36□□□□□ -2.79
GGA1Q06336 YCL001W-BYCL001W-B 255 nt-2.36□□□□□ -2.79
GGA1Q06336 RPL41BYDL133C-A 78 nt-2.37□□□□□ -2.79
GGA1Q06336 YBL100W-CYBL100W-C 120 nt-2.41□□□□□ -2.8
GGA1Q06336 tM(CAU)Q1tM(CAU)Q1 76 nt-2.51□□□□□ -2.81
GGA1Q06336 YLR466C-BYLR466C-B 117 nt-2.52□□□□□ -2.81
GGA1Q06336 YDL114W-AYDL114W-A 114 nt-2.55□□□□□ -2.82
GGA1Q06336 tV(UAC)QtV(UAC)Q 76 nt-2.55□□□□□ -2.82
GGA1Q06336 YKL225WYKL225W 348 nt-2.58□□□□□ -2.82
GGA1Q06336 tS(GCU)Q1tS(GCU)Q1 86 nt-2.59□□□□□ -2.82
GGA1Q06336 YNL338WYNL338W 159 nt-2.6□□□□□ -2.83
GGA1Q06336 YNL337WYNL337W 255 nt-2.61□□□□□ -2.83
GGA1Q06336 snR85snR85 171 nt-2.62□□□□□ -2.83
GGA1Q06336 YDR524C-AYDR524C-A 120 nt-2.68□□□□□ -2.84
GGA1Q06336 YGL041C-BYGL041C-B 183 nt-2.87□□□□□ -2.87
GGA1Q06336 YGR122C-AYGR122C-A 129 nt-2.87□□□□□ -2.87
Retrieved 100 of 7,029 protein–RNA pairs in 10.3 ms