Protein–RNA interactions for Protein: Q04272

VPS20, Vacuolar protein sorting-associated protein 20, yeastyeast

Predictions only

Length 221 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS20Q04272 YDR524W-CYDR524W-C 90 nt-0.51□□□□□ -2.49
VPS20Q04272 YOR170WYOR170W 306 nt-0.51□□□□□ -2.49
VPS20Q04272 YOR231C-AYOR231C-A 201 nt-0.51□□□□□ -2.49
VPS20Q04272 snR69snR69 101 nt-0.52□□□□□ -2.49
VPS20Q04272 YOR329W-AYOR329W-A 210 nt-0.53□□□□□ -2.49
VPS20Q04272 tQ(UUG)QtQ(UUG)Q 76 nt-0.54□□□□□ -2.5
VPS20Q04272 YIL071W-AYIL071W-A 477 nt-0.54□□□□□ -2.5
VPS20Q04272 YJL113WYJL113W 4647 nt-0.54□□□□□ -2.5
VPS20Q04272 snR80snR80 171 nt-0.55□□□□□ -2.5
VPS20Q04272 tM(CAU)Q2tM(CAU)Q2 78 nt-0.55□□□□□ -2.5
VPS20Q04272 YJL077W-AYJL077W-A 87 nt-0.56□□□□□ -2.5
VPS20Q04272 SEC10YLR166C 2616 nt-0.56□□□□□ -2.5
VPS20Q04272 tA(UGC)QtA(UGC)Q 76 nt-0.57□□□□□ -2.5
VPS20Q04272 YGL188C-AYGL188C-A 141 nt-0.59□□□□□ -2.5
VPS20Q04272 snR50snR50 90 nt-0.6□□□□□ -2.51
VPS20Q04272 YGR146C-AYGR146C-A 162 nt-0.61□□□□□ -2.51
VPS20Q04272 PAU9YBL108C-A 129 nt-0.61□□□□□ -2.51
VPS20Q04272 PMP2YEL017C-A 132 nt-0.62□□□□□ -2.51
VPS20Q04272 JLP2YMR132C 627 nt-0.62□□□□□ -2.51
VPS20Q04272 YNL266WYNL266W 420 nt-0.62□□□□□ -2.51
VPS20Q04272 YER090C-AYER090C-A 90 nt-0.63□□□□□ -2.51
VPS20Q04272 snR46snR46 197 nt-0.63□□□□□ -2.51
VPS20Q04272 snR52snR52 92 nt-0.64□□□□□ -2.51
VPS20Q04272 RDS3YPR094W 324 nt-0.66□□□□□ -2.52
VPS20Q04272 URB1YKL014C 5295 nt-0.67□□□□□ -2.52
VPS20Q04272 tL(UAA)QtL(UAA)Q 85 nt-0.68□□□□□ -2.52
VPS20Q04272 snR48snR48 113 nt-0.7□□□□□ -2.52
VPS20Q04272 tD(GUC)QtD(GUC)Q 75 nt-0.74□□□□□ -2.53
VPS20Q04272 YBR178WYBR178W 375 nt-0.75□□□□□ -2.53
VPS20Q04272 YLR342W-AYLR342W-A 174 nt-0.78□□□□□ -2.53
VPS20Q04272 YLR286W-AYLR286W-A 135 nt-0.79□□□□□ -2.54
VPS20Q04272 YNL205CYNL205C 423 nt-0.81□□□□□ -2.54
VPS20Q04272 snR33snR33 183 nt-0.81□□□□□ -2.54
VPS20Q04272 SKI7YOR076C 2244 nt-0.83□□□□□ -2.54
VPS20Q04272 YDL159C-BYDL159C-B 177 nt-0.85□□□□□ -2.55
VPS20Q04272 YOR102WYOR102W 351 nt-0.85□□□□□ -2.55
VPS20Q04272 snR67snR67 82 nt-0.86□□□□□ -2.55
VPS20Q04272 YHL015W-AYHL015W-A 84 nt-0.86□□□□□ -2.55
VPS20Q04272 YBL053WYBL053W 375 nt-0.86□□□□□ -2.55
VPS20Q04272 YNL198CYNL198C 303 nt-0.88□□□□□ -2.55
VPS20Q04272 YJL150WYJL150W 303 nt-0.91□□□□□ -2.56
VPS20Q04272 Q0142Q0142 177 nt-0.92□□□□□ -2.56
VPS20Q04272 YDR406W-AYDR406W-A 246 nt-0.94□□□□□ -2.56
VPS20Q04272 tT(UGU)G1tT(UGU)G1 72 nt-0.95□□□□□ -2.56
VPS20Q04272 tT(UGU)G2tT(UGU)G2 72 nt-0.95□□□□□ -2.56
VPS20Q04272 tT(UGU)PtT(UGU)P 72 nt-0.95□□□□□ -2.56
VPS20Q04272 snR161snR161 161 nt-0.96□□□□□ -2.56
VPS20Q04272 YLR299C-AYLR299C-A 93 nt-0.99□□□□□ -2.57
VPS20Q04272 YBR196C-AYBR196C-A 150 nt-1□□□□□ -2.57
VPS20Q04272 YHL009W-BYHL009W-B 5409 nt-1.02□□□□□ -2.57
VPS20Q04272 tP(UGG)QtP(UGG)Q 72 nt-1.07□□□□□ -2.58
VPS20Q04272 YML054C-AYML054C-A 159 nt-1.09□□□□□ -2.58
VPS20Q04272 SPG3YDR504C 384 nt-1.13□□□□□ -2.59
VPS20Q04272 SOM1YEL059C-A 225 nt-1.13□□□□□ -2.59
VPS20Q04272 YMR046W-AYMR046W-A 129 nt-1.17□□□□□ -2.6
VPS20Q04272 snR77snR77 88 nt-1.23□□□□□ -2.61
VPS20Q04272 YHR180C-BYHR180C-B 105 nt-1.23□□□□□ -2.61
VPS20Q04272 YOR376W-AYOR376W-A 156 nt-1.23□□□□□ -2.61
VPS20Q04272 YCR095W-AYCR095W-A 159 nt-1.25□□□□□ -2.61
VPS20Q04272 CDC65tQ(CUG)M 72 nt-1.28□□□□□ -2.61
VPS20Q04272 YLR466C-BYLR466C-B 117 nt-1.34□□□□□ -2.62
VPS20Q04272 YGR151CYGR151C 336 nt-1.37□□□□□ -2.63
VPS20Q04272 YGR240C-AYGR240C-A 201 nt-1.37□□□□□ -2.63
VPS20Q04272 tM(CAU)Q1tM(CAU)Q1 76 nt-1.38□□□□□ -2.63
VPS20Q04272 YBR109W-AYBR109W-A 225 nt-1.38□□□□□ -2.63
VPS20Q04272 YBL071C-BYBL071C-B 99 nt-1.39□□□□□ -2.63
VPS20Q04272 YCL001W-BYCL001W-B 255 nt-1.39□□□□□ -2.63
VPS20Q04272 YOL083C-AYOL083C-A 141 nt-1.4□□□□□ -2.63
VPS20Q04272 YNL338WYNL338W 159 nt-1.41□□□□□ -2.64
VPS20Q04272 snR38snR38 95 nt-1.43□□□□□ -2.64
VPS20Q04272 YKL106C-AYKL106C-A 120 nt-1.45□□□□□ -2.64
VPS20Q04272 YMR315W-AYMR315W-A 108 nt-1.46□□□□□ -2.64
VPS20Q04272 YBR223W-AYBR223W-A 120 nt-1.46□□□□□ -2.64
VPS20Q04272 YOR316C-AYOR316C-A 210 nt-1.47□□□□□ -2.64
VPS20Q04272 RPL41AYDL184C 78 nt-1.48□□□□□ -2.65
VPS20Q04272 YBR296C-AYBR296C-A 120 nt-1.48□□□□□ -2.65
VPS20Q04272 YOL164W-AYOL164W-A 183 nt-1.5□□□□□ -2.65
VPS20Q04272 snR81snR81 201 nt-1.51□□□□□ -2.65
VPS20Q04272 tY(GUA)QtY(GUA)Q 84 nt-1.54□□□□□ -2.66
VPS20Q04272 YAL037C-AYAL037C-A 93 nt-1.58□□□□□ -2.66
VPS20Q04272 snR47snR47 99 nt-1.58□□□□□ -2.66
VPS20Q04272 YNL337WYNL337W 255 nt-1.68□□□□□ -2.68
VPS20Q04272 YOR309CYOR309C 381 nt-1.72□□□□□ -2.68
VPS20Q04272 tS(GCU)Q1tS(GCU)Q1 86 nt-1.73□□□□□ -2.69
VPS20Q04272 YBL100W-CYBL100W-C 120 nt-1.77□□□□□ -2.69
VPS20Q04272 YGL007C-AYGL007C-A 87 nt-1.82□□□□□ -2.7
VPS20Q04272 Q0032Q0032 291 nt-1.83□□□□□ -2.7
VPS20Q04272 YKL225WYKL225W 348 nt-1.83□□□□□ -2.7
VPS20Q04272 snR6snR6 112 nt-1.85□□□□□ -2.71
VPS20Q04272 YNL103W-AYNL103W-A 90 nt-1.87□□□□□ -2.71
VPS20Q04272 YGL041C-BYGL041C-B 183 nt-1.89□□□□□ -2.71
VPS20Q04272 YNR077CYNR077C 255 nt-1.94□□□□□ -2.72
VPS20Q04272 YOR335W-AYOR335W-A 81 nt-1.96□□□□□ -2.72
VPS20Q04272 snR61snR61 90 nt-1.99□□□□□ -2.73
VPS20Q04272 tV(UAC)QtV(UAC)Q 76 nt-1.99□□□□□ -2.73
VPS20Q04272 YDR034C-AYDR034C-A 177 nt-2.01□□□□□ -2.73
VPS20Q04272 YDL114W-AYDL114W-A 114 nt-2.03□□□□□ -2.73
VPS20Q04272 snR73snR73 106 nt-2.05□□□□□ -2.74
VPS20Q04272 YLR294CYLR294C 330 nt-2.07□□□□□ -2.74
VPS20Q04272 YNL170WYNL170W 396 nt-2.07□□□□□ -2.74
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms