Protein–RNA interactions for Protein: Q03430

RSM28, 37S ribosomal protein RSM28, mitochondrial, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSM28Q03430 YDR371C-AYDR371C-A 105 nt0.59□□□□□ -2.31
RSM28Q03430 YNL067W-BYNL067W-B 141 nt0.57□□□□□ -2.32
RSM28Q03430 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
RSM28Q03430 MLP1YKR095W 5628 nt0.57□□□□□ -2.32
RSM28Q03430 SBH1YER087C-B 249 nt0.56□□□□□ -2.32
RSM28Q03430 CSE1YGL238W 2883 nt0.56□□□□□ -2.32
RSM28Q03430 YPL060C-AYPL060C-A 3315 nt0.55□□□□□ -2.32
RSM28Q03430 YGR146C-AYGR146C-A 162 nt0.54□□□□□ -2.32
RSM28Q03430 YKL145W-AYKL145W-A 93 nt0.54□□□□□ -2.32
RSM28Q03430 ORC3YLL004W 1851 nt0.54□□□□□ -2.32
RSM28Q03430 YOL014WYOL014W 375 nt0.53□□□□□ -2.32
RSM28Q03430 YGR164WYGR164W 336 nt0.51□□□□□ -2.33
RSM28Q03430 RCO1YMR075W 2055 nt0.49□□□□□ -2.33
RSM28Q03430 YBL100W-BYBL100W-B 5313 nt0.45□□□□□ -2.34
RSM28Q03430 MLP2YIL149C 5040 nt0.45□□□□□ -2.34
RSM28Q03430 YNL205CYNL205C 423 nt0.43□□□□□ -2.34
RSM28Q03430 FMP27YLR454W 7887 nt0.42□□□□□ -2.34
RSM28Q03430 ESP1YGR098C 4893 nt0.42□□□□□ -2.34
RSM28Q03430 YBR099CYBR099C 384 nt0.42□□□□□ -2.34
RSM28Q03430 BIR1YJR089W 2865 nt0.42□□□□□ -2.34
RSM28Q03430 YCR095W-AYCR095W-A 159 nt0.41□□□□□ -2.34
RSM28Q03430 SOM1YEL059C-A 225 nt0.41□□□□□ -2.34
RSM28Q03430 YNL170WYNL170W 396 nt0.39□□□□□ -2.35
RSM28Q03430 YOR186C-AYOR186C-A 210 nt0.39□□□□□ -2.35
RSM28Q03430 YCL001W-BYCL001W-B 255 nt0.39□□□□□ -2.35
RSM28Q03430 AI1Q0050 2505 nt0.38□□□□□ -2.35
RSM28Q03430 ATP8Q0080 147 nt0.38□□□□□ -2.35
RSM28Q03430 YNL054W-BYNL054W-B 5250 nt0.36□□□□□ -2.35
RSM28Q03430 PMP2YEL017C-A 132 nt0.36□□□□□ -2.35
RSM28Q03430 YIL071W-AYIL071W-A 477 nt0.36□□□□□ -2.35
RSM28Q03430 snR69snR69 101 nt0.34□□□□□ -2.36
RSM28Q03430 YJL077W-AYJL077W-A 87 nt0.34□□□□□ -2.36
RSM28Q03430 Q0092Q0092 141 nt0.32□□□□□ -2.36
RSM28Q03430 EST1YLR233C 2100 nt0.32□□□□□ -2.36
RSM28Q03430 SEC10YLR166C 2616 nt0.3□□□□□ -2.36
RSM28Q03430 YNL266WYNL266W 420 nt0.3□□□□□ -2.36
RSM28Q03430 YOL013W-AYOL013W-A 192 nt0.28□□□□□ -2.36
RSM28Q03430 SOV1YMR066W 2697 nt0.26□□□□□ -2.37
RSM28Q03430 RDS3YPR094W 324 nt0.25□□□□□ -2.37
RSM28Q03430 tD(GUC)QtD(GUC)Q 75 nt0.24□□□□□ -2.37
RSM28Q03430 YBR178WYBR178W 375 nt0.23□□□□□ -2.37
RSM28Q03430 tQ(UUG)QtQ(UUG)Q 76 nt0.22□□□□□ -2.37
RSM28Q03430 YER078W-AYER078W-A 165 nt0.21□□□□□ -2.38
RSM28Q03430 YBR196C-AYBR196C-A 150 nt0.21□□□□□ -2.38
RSM28Q03430 THO2YNL139C 4794 nt0.15□□□□□ -2.39
RSM28Q03430 YLR286W-AYLR286W-A 135 nt0.13□□□□□ -2.39
RSM28Q03430 YDL159C-BYDL159C-B 177 nt0.12□□□□□ -2.39
RSM28Q03430 YER090C-AYER090C-A 90 nt0.1□□□□□ -2.39
RSM28Q03430 snR128snR128 126 nt0.08□□□□□ -2.4
RSM28Q03430 YLR299C-AYLR299C-A 93 nt0.06□□□□□ -2.4
RSM28Q03430 snR50snR50 90 nt0.06□□□□□ -2.4
RSM28Q03430 snR45snR45 172 nt0.01□□□□□ -2.41
RSM28Q03430 YML100W-AYML100W-A 174 nt-0.01□□□□□ -2.41
RSM28Q03430 YNL103W-AYNL103W-A 90 nt-0.03□□□□□ -2.41
RSM28Q03430 snR61snR61 90 nt-0.06□□□□□ -2.42
RSM28Q03430 YAL037C-AYAL037C-A 93 nt-0.06□□□□□ -2.42
RSM28Q03430 YOL083C-AYOL083C-A 141 nt-0.06□□□□□ -2.42
RSM28Q03430 Q0143Q0143 153 nt-0.07□□□□□ -2.42
RSM28Q03430 snR67snR67 82 nt-0.08□□□□□ -2.42
RSM28Q03430 snR81snR81 201 nt-0.09□□□□□ -2.42
RSM28Q03430 YBL071C-BYBL071C-B 99 nt-0.1□□□□□ -2.43
RSM28Q03430 YGL041C-BYGL041C-B 183 nt-0.12□□□□□ -2.43
RSM28Q03430 YML054C-AYML054C-A 159 nt-0.13□□□□□ -2.43
RSM28Q03430 YHR180C-BYHR180C-B 105 nt-0.17□□□□□ -2.44
RSM28Q03430 YOL164W-AYOL164W-A 183 nt-0.2□□□□□ -2.44
RSM28Q03430 snR85snR85 171 nt-0.21□□□□□ -2.44
RSM28Q03430 TFB5YDR079C-A 219 nt-0.21□□□□□ -2.44
RSM28Q03430 SBH2YER019C-A 267 nt-0.22□□□□□ -2.44
RSM28Q03430 PAU9YBL108C-A 129 nt-0.22□□□□□ -2.44
RSM28Q03430 YBL100W-CYBL100W-C 120 nt-0.24□□□□□ -2.45
RSM28Q03430 SKI7YOR076C 2244 nt-0.29□□□□□ -2.46
RSM28Q03430 tA(UGC)QtA(UGC)Q 76 nt-0.29□□□□□ -2.46
RSM28Q03430 YGR240C-AYGR240C-A 201 nt-0.3□□□□□ -2.46
RSM28Q03430 snR47snR47 99 nt-0.32□□□□□ -2.46
RSM28Q03430 YJL113WYJL113W 4647 nt-0.34□□□□□ -2.46
RSM28Q03430 RPL41AYDL184C 78 nt-0.35□□□□□ -2.47
RSM28Q03430 YMR326CYMR326C 309 nt-0.35□□□□□ -2.47
RSM28Q03430 YBR109W-AYBR109W-A 225 nt-0.35□□□□□ -2.47
RSM28Q03430 YBR296C-AYBR296C-A 120 nt-0.36□□□□□ -2.47
RSM28Q03430 URB1YKL014C 5295 nt-0.36□□□□□ -2.47
RSM28Q03430 tS(GCU)Q1tS(GCU)Q1 86 nt-0.4□□□□□ -2.47
RSM28Q03430 YHR217CYHR217C 462 nt-0.4□□□□□ -2.47
RSM28Q03430 snR62snR62 100 nt-0.43□□□□□ -2.48
RSM28Q03430 YBL109WYBL109W 336 nt-0.45□□□□□ -2.48
RSM28Q03430 snR38snR38 95 nt-0.46□□□□□ -2.48
RSM28Q03430 YDR034C-AYDR034C-A 177 nt-0.5□□□□□ -2.49
RSM28Q03430 YHL009W-BYHL009W-B 5409 nt-0.52□□□□□ -2.49
RSM28Q03430 YDR524C-AYDR524C-A 120 nt-0.58□□□□□ -2.5
RSM28Q03430 YKL106C-AYKL106C-A 120 nt-0.59□□□□□ -2.5
RSM28Q03430 YKL225WYKL225W 348 nt-0.59□□□□□ -2.5
RSM28Q03430 snR161snR161 161 nt-0.6□□□□□ -2.51
RSM28Q03430 YOR376W-AYOR376W-A 156 nt-0.63□□□□□ -2.51
RSM28Q03430 YLL066W-BYLL066W-B 171 nt-0.71□□□□□ -2.52
RSM28Q03430 YOR316C-AYOR316C-A 210 nt-0.75□□□□□ -2.53
RSM28Q03430 YDL247W-AYDL247W-A 75 nt-0.76□□□□□ -2.53
RSM28Q03430 snR64snR64 101 nt-0.79□□□□□ -2.54
RSM28Q03430 snR33snR33 183 nt-0.8□□□□□ -2.54
RSM28Q03430 tT(UGU)G1tT(UGU)G1 72 nt-0.85□□□□□ -2.55
RSM28Q03430 tT(UGU)G2tT(UGU)G2 72 nt-0.85□□□□□ -2.55
RSM28Q03430 tT(UGU)PtT(UGU)P 72 nt-0.85□□□□□ -2.55
Retrieved 100 of 7,029 protein–RNA pairs in 30.9 ms