Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
HSPG2P98160 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HSPG2P98160 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HSPG2P98160 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.46□□□□□ -0.41
HSPG2P98160 AL390719.1-204ENST00000412397 1219 ntBASIC12.46□□□□□ -0.41
HSPG2P98160 PGM5P4-201ENST00000421970 445 ntBASIC12.46□□□□□ -0.41
HSPG2P98160 SPDYE13P-201ENST00000445314 798 ntBASIC12.46□□□□□ -0.41
HSPG2P98160 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.46□□□□□ -0.41
HSPG2P98160 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.46□□□□□ -0.41
HSPG2P98160 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.46□□□□□ -0.41
HSPG2P98160 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
HSPG2P98160 AC010653.2-201ENST00000623505 997 ntBASIC12.46□□□□□ -0.41
HSPG2P98160 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HSPG2P98160 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HSPG2P98160 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
HSPG2P98160 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
HSPG2P98160 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
HSPG2P98160 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
HSPG2P98160 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC12.46□□□□□ -0.41
HSPG2P98160 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.46□□□□□ -0.42
HSPG2P98160 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HSPG2P98160 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HSPG2P98160 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC12.46□□□□□ -0.42
HSPG2P98160 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
HSPG2P98160 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC12.46□□□□□ -0.42
HSPG2P98160 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HSPG2P98160 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HSPG2P98160 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
HSPG2P98160 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.46□□□□□ -0.42
HSPG2P98160 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HSPG2P98160 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
HSPG2P98160 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC12.45□□□□□ -0.42
HSPG2P98160 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HSPG2P98160 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
HSPG2P98160 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.45□□□□□ -0.42
HSPG2P98160 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HSPG2P98160 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HSPG2P98160 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HSPG2P98160 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HSPG2P98160 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
HSPG2P98160 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HSPG2P98160 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.45□□□□□ -0.42
HSPG2P98160 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC12.45□□□□□ -0.42
HSPG2P98160 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HSPG2P98160 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.45□□□□□ -0.42
HSPG2P98160 HOMER2P1-201ENST00000455653 964 ntBASIC12.45□□□□□ -0.42
HSPG2P98160 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.45□□□□□ -0.42
HSPG2P98160 C1QL1P1-201ENST00000568105 661 ntBASIC12.45□□□□□ -0.42
HSPG2P98160 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.45□□□□□ -0.42
HSPG2P98160 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HSPG2P98160 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
HSPG2P98160 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
HSPG2P98160 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.45□□□□□ -0.42
HSPG2P98160 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.45□□□□□ -0.42
HSPG2P98160 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HSPG2P98160 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HSPG2P98160 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC12.44□□□□□ -0.42
HSPG2P98160 HMGN1P19-201ENST00000436976 333 ntBASIC12.44□□□□□ -0.42
HSPG2P98160 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.44□□□□□ -0.42
HSPG2P98160 AC092183.1-201ENST00000469884 875 ntBASIC12.44□□□□□ -0.42
HSPG2P98160 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.44□□□□□ -0.42
HSPG2P98160 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HSPG2P98160 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HSPG2P98160 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC12.44□□□□□ -0.42
HSPG2P98160 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HSPG2P98160 AL136038.3-201ENST00000561909 1096 ntBASIC12.44□□□□□ -0.42
HSPG2P98160 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.44□□□□□ -0.42
HSPG2P98160 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HSPG2P98160 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HSPG2P98160 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC12.44□□□□□ -0.42
HSPG2P98160 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HSPG2P98160 AL022342.1-201ENST00000400363 863 ntBASIC12.44□□□□□ -0.42
HSPG2P98160 AL732292.2-201ENST00000609649 430 ntBASIC12.44□□□□□ -0.42
HSPG2P98160 NPAP1P7-201ENST00000613027 823 ntBASIC12.44□□□□□ -0.42
HSPG2P98160 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HSPG2P98160 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.44□□□□□ -0.42
HSPG2P98160 AC080038.3-201ENST00000623346 1952 ntBASIC12.44□□□□□ -0.42
HSPG2P98160 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HSPG2P98160 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HSPG2P98160 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.44□□□□□ -0.42
HSPG2P98160 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HSPG2P98160 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC12.43□□□□□ -0.42
HSPG2P98160 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HSPG2P98160 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HSPG2P98160 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HSPG2P98160 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
HSPG2P98160 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.43□□□□□ -0.42
HSPG2P98160 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HSPG2P98160 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
HSPG2P98160 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.43□□□□□ -0.42
HSPG2P98160 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HSPG2P98160 CREM-210ENST00000374721 2020 ntTSL 5 BASIC12.43□□□□□ -0.42
HSPG2P98160 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HSPG2P98160 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HSPG2P98160 RCC2P6-201ENST00000526625 1557 ntBASIC12.43□□□□□ -0.42
HSPG2P98160 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HSPG2P98160 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC12.43□□□□□ -0.42
HSPG2P98160 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HSPG2P98160 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.43□□□□□ -0.42
HSPG2P98160 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms