Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CX3CL1P78423 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.04■□□□□ 0.16
CX3CL1P78423 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.04■□□□□ 0.16
CX3CL1P78423 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CX3CL1P78423 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.04■□□□□ 0.16
CX3CL1P78423 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.04■□□□□ 0.16
CX3CL1P78423 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.04■□□□□ 0.16
CX3CL1P78423 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.04■□□□□ 0.16
CX3CL1P78423 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CX3CL1P78423 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CX3CL1P78423 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.04■□□□□ 0.16
CX3CL1P78423 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.04■□□□□ 0.16
CX3CL1P78423 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CX3CL1P78423 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CX3CL1P78423 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CX3CL1P78423 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CX3CL1P78423 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CX3CL1P78423 AC087289.5-201ENST00000586076 3175 ntBASIC16.03■□□□□ 0.16
CX3CL1P78423 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CX3CL1P78423 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CL1P78423 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CX3CL1P78423 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CX3CL1P78423 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.03■□□□□ 0.16
CX3CL1P78423 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CL1P78423 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CL1P78423 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CL1P78423 DPP3P2-201ENST00000416030 1696 ntBASIC16.03■□□□□ 0.16
CX3CL1P78423 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.03■□□□□ 0.16
CX3CL1P78423 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.03■□□□□ 0.16
CX3CL1P78423 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CL1P78423 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CL1P78423 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.03■□□□□ 0.16
CX3CL1P78423 MIPEPP3-201ENST00000412105 444 ntBASIC16.03■□□□□ 0.16
CX3CL1P78423 TSPY6P-201ENST00000448518 926 ntBASIC16.03■□□□□ 0.16
CX3CL1P78423 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.03■□□□□ 0.16
CX3CL1P78423 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.03■□□□□ 0.16
CX3CL1P78423 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CL1P78423 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.03■□□□□ 0.16
CX3CL1P78423 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.03■□□□□ 0.16
CX3CL1P78423 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CL1P78423 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CL1P78423 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CL1P78423 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.03■□□□□ 0.16
CX3CL1P78423 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CL1P78423 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CL1P78423 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.03■□□□□ 0.16
CX3CL1P78423 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.02■□□□□ 0.16
CX3CL1P78423 AL512408.1-201ENST00000569378 2000 ntBASIC16.02■□□□□ 0.16
CX3CL1P78423 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CX3CL1P78423 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CX3CL1P78423 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CX3CL1P78423 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CX3CL1P78423 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.02■□□□□ 0.16
CX3CL1P78423 SMG8-203ENST00000578922 2178 ntBASIC16.02■□□□□ 0.16
CX3CL1P78423 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CX3CL1P78423 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CX3CL1P78423 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CX3CL1P78423 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
CX3CL1P78423 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.02■□□□□ 0.16
CX3CL1P78423 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.02■□□□□ 0.16
CX3CL1P78423 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CX3CL1P78423 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CX3CL1P78423 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CX3CL1P78423 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CX3CL1P78423 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CX3CL1P78423 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CX3CL1P78423 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.02■□□□□ 0.15
CX3CL1P78423 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CX3CL1P78423 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.02■□□□□ 0.15
CX3CL1P78423 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CX3CL1P78423 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CL1P78423 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CL1P78423 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.01■□□□□ 0.15
CX3CL1P78423 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.01■□□□□ 0.15
CX3CL1P78423 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CL1P78423 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CL1P78423 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.01■□□□□ 0.15
CX3CL1P78423 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.01■□□□□ 0.15
CX3CL1P78423 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CL1P78423 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.01■□□□□ 0.15
CX3CL1P78423 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.01■□□□□ 0.15
CX3CL1P78423 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CL1P78423 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.01■□□□□ 0.15
CX3CL1P78423 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CL1P78423 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CL1P78423 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CL1P78423 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CL1P78423 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16■□□□□ 0.15
CX3CL1P78423 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16■□□□□ 0.15
CX3CL1P78423 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16■□□□□ 0.15
CX3CL1P78423 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CX3CL1P78423 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CL1P78423 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CL1P78423 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CL1P78423 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CL1P78423 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CX3CL1P78423 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16■□□□□ 0.15
CX3CL1P78423 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16■□□□□ 0.15
CX3CL1P78423 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CX3CL1P78423 GUSBP6-202ENST00000438529 1198 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms