Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2NP61088 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
UBE2NP61088 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2NP61088 KRT8P17-201ENST00000453110 1448 ntBASIC17.52■□□□□ 0.4
UBE2NP61088 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
UBE2NP61088 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBE2NP61088 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UBE2NP61088 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBE2NP61088 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBE2NP61088 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.51■□□□□ 0.39
UBE2NP61088 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2NP61088 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2NP61088 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.51■□□□□ 0.39
UBE2NP61088 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2NP61088 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2NP61088 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.51■□□□□ 0.39
UBE2NP61088 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
UBE2NP61088 KRT17P3-201ENST00000420566 1262 ntBASIC17.51■□□□□ 0.39
UBE2NP61088 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.51■□□□□ 0.39
UBE2NP61088 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
UBE2NP61088 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.51■□□□□ 0.39
UBE2NP61088 AC008687.6-201ENST00000596318 630 ntBASIC17.51■□□□□ 0.39
UBE2NP61088 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2NP61088 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2NP61088 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2NP61088 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2NP61088 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2NP61088 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2NP61088 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2NP61088 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.51■□□□□ 0.39
UBE2NP61088 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.5■□□□□ 0.39
UBE2NP61088 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.5■□□□□ 0.39
UBE2NP61088 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2NP61088 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2NP61088 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.5■□□□□ 0.39
UBE2NP61088 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2NP61088 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.5■□□□□ 0.39
UBE2NP61088 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2NP61088 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
UBE2NP61088 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
UBE2NP61088 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UBE2NP61088 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.5■□□□□ 0.39
UBE2NP61088 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UBE2NP61088 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.5■□□□□ 0.39
UBE2NP61088 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.5■□□□□ 0.39
UBE2NP61088 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2NP61088 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2NP61088 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.5■□□□□ 0.39
UBE2NP61088 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2NP61088 SMG8-203ENST00000578922 2178 ntBASIC17.5■□□□□ 0.39
UBE2NP61088 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBE2NP61088 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2NP61088 PTBP1P-201ENST00000554374 1601 ntBASIC17.5■□□□□ 0.39
UBE2NP61088 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2NP61088 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2NP61088 FEM1AP1-201ENST00000431297 1995 ntBASIC17.49■□□□□ 0.39
UBE2NP61088 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
UBE2NP61088 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
UBE2NP61088 KRT16P6-202ENST00000425692 1426 ntBASIC17.49■□□□□ 0.39
UBE2NP61088 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.49■□□□□ 0.39
UBE2NP61088 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 KRT18P29-201ENST00000397031 1267 ntBASIC17.49■□□□□ 0.39
UBE2NP61088 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.49■□□□□ 0.39
UBE2NP61088 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.49■□□□□ 0.39
UBE2NP61088 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.49■□□□□ 0.39
UBE2NP61088 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 AC006058.3-201ENST00000606217 1069 ntBASIC17.49■□□□□ 0.39
UBE2NP61088 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 AC073314.1-201ENST00000568729 2216 ntBASIC17.49■□□□□ 0.39
UBE2NP61088 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.49■□□□□ 0.39
UBE2NP61088 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.49■□□□□ 0.39
UBE2NP61088 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
UBE2NP61088 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2NP61088 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
UBE2NP61088 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.48■□□□□ 0.39
UBE2NP61088 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.48■□□□□ 0.39
UBE2NP61088 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.48■□□□□ 0.39
UBE2NP61088 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.48■□□□□ 0.39
UBE2NP61088 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.48■□□□□ 0.39
UBE2NP61088 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms