Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN18P56856 AC008550.1-201ENST00000511500 884 ntBASIC17.84■□□□□ 0.45
CLDN18P56856 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 FEM1AP1-201ENST00000431297 1995 ntBASIC17.84■□□□□ 0.45
CLDN18P56856 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN18P56856 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.83■□□□□ 0.45
CLDN18P56856 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CLDN18P56856 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN18P56856 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN18P56856 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN18P56856 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CLDN18P56856 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
CLDN18P56856 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN18P56856 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN18P56856 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN18P56856 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN18P56856 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CLDN18P56856 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN18P56856 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN18P56856 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN18P56856 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN18P56856 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
CLDN18P56856 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CLDN18P56856 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN18P56856 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN18P56856 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN18P56856 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN18P56856 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN18P56856 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN18P56856 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN18P56856 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLDN18P56856 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN18P56856 PKD1P6-201ENST00000343738 4769 ntBASIC17.82■□□□□ 0.44
CLDN18P56856 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN18P56856 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CLDN18P56856 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLDN18P56856 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN18P56856 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLDN18P56856 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN18P56856 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN18P56856 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN18P56856 RPS2P4-201ENST00000476944 856 ntBASIC17.81■□□□□ 0.44
CLDN18P56856 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDN18P56856 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 BX119927.1-201ENST00000636596 1552 ntBASIC17.81■□□□□ 0.44
CLDN18P56856 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLDN18P56856 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 NBPF21P-201ENST00000425093 1451 ntBASIC17.81■□□□□ 0.44
CLDN18P56856 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN18P56856 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLDN18P56856 GABARAPL3-202ENST00000624044 1851 ntBASIC17.8■□□□□ 0.44
CLDN18P56856 AC116351.2-201ENST00000606540 1585 ntBASIC17.8■□□□□ 0.44
CLDN18P56856 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN18P56856 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
CLDN18P56856 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN18P56856 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN18P56856 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLDN18P56856 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN18P56856 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN18P56856 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN18P56856 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN18P56856 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.8■□□□□ 0.44
CLDN18P56856 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN18P56856 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN18P56856 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN18P56856 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN18P56856 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLDN18P56856 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN18P56856 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN18P56856 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN18P56856 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms