Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS2P54278 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS2P54278 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.54■□□□□ 0.88
PMS2P54278 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS2P54278 Z82202.1-201ENST00000623446 1880 ntBASIC20.54■□□□□ 0.88
PMS2P54278 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.54■□□□□ 0.88
PMS2P54278 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PMS2P54278 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS2P54278 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS2P54278 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS2P54278 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PMS2P54278 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.54■□□□□ 0.88
PMS2P54278 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
PMS2P54278 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.54■□□□□ 0.88
PMS2P54278 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.54■□□□□ 0.88
PMS2P54278 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.54■□□□□ 0.88
PMS2P54278 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PMS2P54278 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS2P54278 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PMS2P54278 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS2P54278 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
PMS2P54278 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS2P54278 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.54■□□□□ 0.88
PMS2P54278 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS2P54278 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
PMS2P54278 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS2P54278 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.53■□□□□ 0.88
PMS2P54278 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.53■□□□□ 0.88
PMS2P54278 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.53■□□□□ 0.88
PMS2P54278 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS2P54278 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PMS2P54278 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.53■□□□□ 0.88
PMS2P54278 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
PMS2P54278 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS2P54278 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PMS2P54278 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS2P54278 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PMS2P54278 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PMS2P54278 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PMS2P54278 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS2P54278 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS2P54278 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PMS2P54278 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.53■□□□□ 0.88
PMS2P54278 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PMS2P54278 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS2P54278 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS2P54278 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS2P54278 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS2P54278 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS2P54278 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.52■□□□□ 0.88
PMS2P54278 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.52■□□□□ 0.88
PMS2P54278 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
PMS2P54278 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.52■□□□□ 0.88
PMS2P54278 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.52■□□□□ 0.88
PMS2P54278 AC079140.4-201ENST00000507448 529 ntBASIC20.52■□□□□ 0.88
PMS2P54278 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.52■□□□□ 0.88
PMS2P54278 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PMS2P54278 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PMS2P54278 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.52■□□□□ 0.87
PMS2P54278 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PMS2P54278 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PMS2P54278 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.51■□□□□ 0.87
PMS2P54278 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.51■□□□□ 0.87
PMS2P54278 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PMS2P54278 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.51■□□□□ 0.87
PMS2P54278 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.51■□□□□ 0.87
PMS2P54278 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.51■□□□□ 0.87
PMS2P54278 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.51■□□□□ 0.87
PMS2P54278 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.51■□□□□ 0.87
PMS2P54278 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.51■□□□□ 0.87
PMS2P54278 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PMS2P54278 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PMS2P54278 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.51■□□□□ 0.87
PMS2P54278 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.5■□□□□ 0.87
PMS2P54278 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.5■□□□□ 0.87
PMS2P54278 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PMS2P54278 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PMS2P54278 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
PMS2P54278 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PMS2P54278 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.5■□□□□ 0.87
PMS2P54278 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.5■□□□□ 0.87
PMS2P54278 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.5■□□□□ 0.87
PMS2P54278 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PMS2P54278 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PMS2P54278 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms