Protein–RNA interactions for Protein: P53937

SWS2, 37S ribosomal protein SWS2, mitochondrial, yeastyeast

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWS2P53937 YOR170WYOR170W 306 nt-0.6□□□□□ -2.51
SWS2P53937 URB1YKL014C 5295 nt-0.61□□□□□ -2.51
SWS2P53937 PAU9YBL108C-A 129 nt-0.62□□□□□ -2.51
SWS2P53937 YPL152W-AYPL152W-A 99 nt-0.62□□□□□ -2.51
SWS2P53937 snR39BsnR39B 96 nt-0.63□□□□□ -2.51
SWS2P53937 snR69snR69 101 nt-0.64□□□□□ -2.51
SWS2P53937 tT(UGU)G1tT(UGU)G1 72 nt-0.64□□□□□ -2.51
SWS2P53937 tT(UGU)G2tT(UGU)G2 72 nt-0.64□□□□□ -2.51
SWS2P53937 tT(UGU)PtT(UGU)P 72 nt-0.64□□□□□ -2.51
SWS2P53937 YDL007C-AYDL007C-A 258 nt-0.65□□□□□ -2.51
SWS2P53937 tA(UGC)QtA(UGC)Q 76 nt-0.68□□□□□ -2.52
SWS2P53937 YDR524W-CYDR524W-C 90 nt-0.68□□□□□ -2.52
SWS2P53937 YGR146C-AYGR146C-A 162 nt-0.68□□□□□ -2.52
SWS2P53937 YNL097C-BYNL097C-B 123 nt-0.68□□□□□ -2.52
SWS2P53937 YPL060C-AYPL060C-A 3315 nt-0.7□□□□□ -2.52
SWS2P53937 YGL188C-AYGL188C-A 141 nt-0.7□□□□□ -2.52
SWS2P53937 YNL067W-BYNL067W-B 141 nt-0.7□□□□□ -2.52
SWS2P53937 YOR302WYOR302W 78 nt-0.71□□□□□ -2.52
SWS2P53937 YOR329W-AYOR329W-A 210 nt-0.73□□□□□ -2.53
SWS2P53937 RDS3YPR094W 324 nt-0.73□□□□□ -2.53
SWS2P53937 snR33snR33 183 nt-0.73□□□□□ -2.53
SWS2P53937 PMP2YEL017C-A 132 nt-0.74□□□□□ -2.53
SWS2P53937 snR161snR161 161 nt-0.75□□□□□ -2.53
SWS2P53937 YER090C-AYER090C-A 90 nt-0.76□□□□□ -2.53
SWS2P53937 YOR231C-AYOR231C-A 201 nt-0.78□□□□□ -2.53
SWS2P53937 YLR342W-AYLR342W-A 174 nt-0.81□□□□□ -2.54
SWS2P53937 snR50snR50 90 nt-0.81□□□□□ -2.54
SWS2P53937 snR52snR52 92 nt-0.81□□□□□ -2.54
SWS2P53937 YNL266WYNL266W 420 nt-0.82□□□□□ -2.54
SWS2P53937 YHL009W-BYHL009W-B 5409 nt-0.83□□□□□ -2.54
SWS2P53937 tD(GUC)QtD(GUC)Q 75 nt-0.87□□□□□ -2.55
SWS2P53937 snR48snR48 113 nt-0.87□□□□□ -2.55
SWS2P53937 YNL205CYNL205C 423 nt-0.88□□□□□ -2.55
SWS2P53937 YNR077CYNR077C 255 nt-0.88□□□□□ -2.55
SWS2P53937 snR80snR80 171 nt-0.9□□□□□ -2.55
SWS2P53937 YBR223W-AYBR223W-A 120 nt-0.9□□□□□ -2.55
SWS2P53937 JLP2YMR132C 627 nt-0.91□□□□□ -2.56
SWS2P53937 YLR286W-AYLR286W-A 135 nt-0.92□□□□□ -2.56
SWS2P53937 YOR102WYOR102W 351 nt-0.92□□□□□ -2.56
SWS2P53937 YHL015W-AYHL015W-A 84 nt-0.93□□□□□ -2.56
SWS2P53937 YBR178WYBR178W 375 nt-0.93□□□□□ -2.56
SWS2P53937 snR67snR67 82 nt-0.94□□□□□ -2.56
SWS2P53937 tL(UAA)QtL(UAA)Q 85 nt-0.97□□□□□ -2.56
SWS2P53937 YDL159C-BYDL159C-B 177 nt-0.98□□□□□ -2.57
SWS2P53937 YDR406W-AYDR406W-A 246 nt-1.01□□□□□ -2.57
SWS2P53937 YBR196C-AYBR196C-A 150 nt-1.11□□□□□ -2.59
SWS2P53937 YLR299C-AYLR299C-A 93 nt-1.13□□□□□ -2.59
SWS2P53937 SKI7YOR076C 2244 nt-1.13□□□□□ -2.59
SWS2P53937 tP(UGG)QtP(UGG)Q 72 nt-1.17□□□□□ -2.6
SWS2P53937 YNL198CYNL198C 303 nt-1.2□□□□□ -2.6
SWS2P53937 Q0142Q0142 177 nt-1.22□□□□□ -2.6
SWS2P53937 YJL150WYJL150W 303 nt-1.28□□□□□ -2.61
SWS2P53937 SOM1YEL059C-A 225 nt-1.29□□□□□ -2.62
SWS2P53937 YML054C-AYML054C-A 159 nt-1.29□□□□□ -2.62
SWS2P53937 YMR046W-AYMR046W-A 129 nt-1.29□□□□□ -2.62
SWS2P53937 YBL053WYBL053W 375 nt-1.35□□□□□ -2.63
SWS2P53937 YHR180C-BYHR180C-B 105 nt-1.37□□□□□ -2.63
SWS2P53937 YCR095W-AYCR095W-A 159 nt-1.39□□□□□ -2.63
SWS2P53937 tY(GUA)QtY(GUA)Q 84 nt-1.4□□□□□ -2.63
SWS2P53937 SPG3YDR504C 384 nt-1.43□□□□□ -2.64
SWS2P53937 YGR240C-AYGR240C-A 201 nt-1.5□□□□□ -2.65
SWS2P53937 tM(CAU)Q1tM(CAU)Q1 76 nt-1.51□□□□□ -2.65
SWS2P53937 CDC65tQ(CUG)M 72 nt-1.57□□□□□ -2.66
SWS2P53937 YOR376W-AYOR376W-A 156 nt-1.57□□□□□ -2.66
SWS2P53937 snR77snR77 88 nt-1.62□□□□□ -2.67
SWS2P53937 YGR151CYGR151C 336 nt-1.64□□□□□ -2.67
SWS2P53937 YKL106C-AYKL106C-A 120 nt-1.64□□□□□ -2.67
SWS2P53937 YLR466C-BYLR466C-B 117 nt-1.67□□□□□ -2.68
SWS2P53937 RPL41AYDL184C 78 nt-1.68□□□□□ -2.68
SWS2P53937 YOL083C-AYOL083C-A 141 nt-1.69□□□□□ -2.68
SWS2P53937 YBR296C-AYBR296C-A 120 nt-1.7□□□□□ -2.68
SWS2P53937 YBR126W-BYBR126W-B 144 nt-1.71□□□□□ -2.68
SWS2P53937 YMR315W-AYMR315W-A 108 nt-1.72□□□□□ -2.68
SWS2P53937 YOR316C-AYOR316C-A 210 nt-1.72□□□□□ -2.68
SWS2P53937 YCL001W-BYCL001W-B 255 nt-1.72□□□□□ -2.68
SWS2P53937 YBR109W-AYBR109W-A 225 nt-1.75□□□□□ -2.69
SWS2P53937 snR81snR81 201 nt-1.76□□□□□ -2.69
SWS2P53937 YNL338WYNL338W 159 nt-1.77□□□□□ -2.69
SWS2P53937 YBL071C-BYBL071C-B 99 nt-1.79□□□□□ -2.7
SWS2P53937 YOL164W-AYOL164W-A 183 nt-1.83□□□□□ -2.7
SWS2P53937 YAL037C-AYAL037C-A 93 nt-1.85□□□□□ -2.71
SWS2P53937 YBL100W-CYBL100W-C 120 nt-1.87□□□□□ -2.71
SWS2P53937 snR47snR47 99 nt-1.9□□□□□ -2.71
SWS2P53937 snR38snR38 95 nt-1.91□□□□□ -2.72
SWS2P53937 YNL337WYNL337W 255 nt-1.99□□□□□ -2.73
SWS2P53937 YDR543CYDR543C 300 nt-2.05□□□□□ -2.74
SWS2P53937 Q0032Q0032 291 nt-2.11□□□□□ -2.75
SWS2P53937 YOR309CYOR309C 381 nt-2.15□□□□□ -2.75
SWS2P53937 tS(GCU)Q1tS(GCU)Q1 86 nt-2.2□□□□□ -2.76
SWS2P53937 YKL225WYKL225W 348 nt-2.21□□□□□ -2.76
SWS2P53937 YGL007C-AYGL007C-A 87 nt-2.25□□□□□ -2.77
SWS2P53937 YGL041C-BYGL041C-B 183 nt-2.26□□□□□ -2.77
SWS2P53937 YOL166W-AYOL166W-A 156 nt-2.34□□□□□ -2.78
SWS2P53937 snR61snR61 90 nt-2.35□□□□□ -2.79
SWS2P53937 YNL103W-AYNL103W-A 90 nt-2.35□□□□□ -2.79
SWS2P53937 snR6snR6 112 nt-2.36□□□□□ -2.79
SWS2P53937 YDL114W-AYDL114W-A 114 nt-2.36□□□□□ -2.79
SWS2P53937 RPL41BYDL133C-A 78 nt-2.36□□□□□ -2.79
SWS2P53937 YDR034C-AYDR034C-A 177 nt-2.4□□□□□ -2.79
SWS2P53937 YOR335W-AYOR335W-A 81 nt-2.43□□□□□ -2.8
Retrieved 100 of 7,029 protein–RNA pairs in 60.7 ms