Protein–RNA interactions for Protein: P53905

LSM7, U6 snRNA-associated Sm-like protein LSm7, yeastyeast

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM7P53905 YOR170WYOR170W 306 nt-1.14□□□□□ -2.59
LSM7P53905 YNL266WYNL266W 420 nt-1.15□□□□□ -2.59
LSM7P53905 RDS3YPR094W 324 nt-1.15□□□□□ -2.59
LSM7P53905 YER181CYER181C 324 nt-1.16□□□□□ -2.6
LSM7P53905 YGR146C-AYGR146C-A 162 nt-1.16□□□□□ -2.6
LSM7P53905 YBR131C-AYBR131C-A 90 nt-1.16□□□□□ -2.6
LSM7P53905 snR50snR50 90 nt-1.16□□□□□ -2.6
LSM7P53905 YNL277W-AYNL277W-A 189 nt-1.17□□□□□ -2.6
LSM7P53905 YPR012WYPR012W 255 nt-1.17□□□□□ -2.6
LSM7P53905 PMP2YEL017C-A 132 nt-1.18□□□□□ -2.6
LSM7P53905 snR39BsnR39B 96 nt-1.18□□□□□ -2.6
LSM7P53905 YFL019CYFL019C 354 nt-1.21□□□□□ -2.6
LSM7P53905 snR55snR55 98 nt-1.23□□□□□ -2.61
LSM7P53905 GIM4YEL003W 336 nt-1.23□□□□□ -2.61
LSM7P53905 JLP2YMR132C 627 nt-1.28□□□□□ -2.61
LSM7P53905 YOR329W-AYOR329W-A 210 nt-1.28□□□□□ -2.61
LSM7P53905 snR67snR67 82 nt-1.33□□□□□ -2.62
LSM7P53905 tD(GUC)QtD(GUC)Q 75 nt-1.33□□□□□ -2.62
LSM7P53905 snR161snR161 161 nt-1.33□□□□□ -2.62
LSM7P53905 YNL097C-BYNL097C-B 123 nt-1.34□□□□□ -2.62
LSM7P53905 Q0144Q0144 330 nt-1.35□□□□□ -2.63
LSM7P53905 YLR286W-AYLR286W-A 135 nt-1.38□□□□□ -2.63
LSM7P53905 YOL155W-AYOL155W-A 135 nt-1.4□□□□□ -2.63
LSM7P53905 YNL205CYNL205C 423 nt-1.43□□□□□ -2.64
LSM7P53905 YBR178WYBR178W 375 nt-1.43□□□□□ -2.64
LSM7P53905 SKI7YOR076C 2244 nt-1.43□□□□□ -2.64
LSM7P53905 YBR223W-AYBR223W-A 120 nt-1.44□□□□□ -2.64
LSM7P53905 YDL159C-BYDL159C-B 177 nt-1.45□□□□□ -2.64
LSM7P53905 tP(UGG)QtP(UGG)Q 72 nt-1.47□□□□□ -2.64
LSM7P53905 YOR302WYOR302W 78 nt-1.47□□□□□ -2.64
LSM7P53905 snR48snR48 113 nt-1.49□□□□□ -2.65
LSM7P53905 snR65snR65 100 nt-1.5□□□□□ -2.65
LSM7P53905 YPL152W-AYPL152W-A 99 nt-1.51□□□□□ -2.65
LSM7P53905 YOR102WYOR102W 351 nt-1.55□□□□□ -2.66
LSM7P53905 YGL188C-AYGL188C-A 141 nt-1.57□□□□□ -2.66
LSM7P53905 tL(UAA)QtL(UAA)Q 85 nt-1.59□□□□□ -2.66
LSM7P53905 YML054C-AYML054C-A 159 nt-1.59□□□□□ -2.66
LSM7P53905 snR52snR52 92 nt-1.59□□□□□ -2.66
LSM7P53905 YLR342W-AYLR342W-A 174 nt-1.6□□□□□ -2.67
LSM7P53905 YHR175W-AYHR175W-A 150 nt-1.64□□□□□ -2.67
LSM7P53905 YLR299C-AYLR299C-A 93 nt-1.65□□□□□ -2.67
LSM7P53905 YHL015W-AYHL015W-A 84 nt-1.68□□□□□ -2.68
LSM7P53905 YBR196C-AYBR196C-A 150 nt-1.7□□□□□ -2.68
LSM7P53905 YNR077CYNR077C 255 nt-1.75□□□□□ -2.69
LSM7P53905 CDC65tQ(CUG)M 72 nt-1.76□□□□□ -2.69
LSM7P53905 YGR240C-AYGR240C-A 201 nt-1.76□□□□□ -2.69
LSM7P53905 tR(ACG)Q2tR(ACG)Q2 74 nt-1.77□□□□□ -2.69
LSM7P53905 snR56snR56 88 nt-1.79□□□□□ -2.7
LSM7P53905 YOR231C-AYOR231C-A 201 nt-1.81□□□□□ -2.7
LSM7P53905 snR80snR80 171 nt-1.82□□□□□ -2.7
LSM7P53905 snR77snR77 88 nt-1.83□□□□□ -2.7
LSM7P53905 tY(GUA)QtY(GUA)Q 84 nt-1.89□□□□□ -2.71
LSM7P53905 YNL198CYNL198C 303 nt-1.91□□□□□ -2.72
LSM7P53905 YHR180C-BYHR180C-B 105 nt-1.92□□□□□ -2.72
LSM7P53905 YOR376W-AYOR376W-A 156 nt-1.93□□□□□ -2.72
LSM7P53905 snR81snR81 201 nt-1.97□□□□□ -2.72
LSM7P53905 YDR406W-AYDR406W-A 246 nt-1.97□□□□□ -2.72
LSM7P53905 YMR315W-AYMR315W-A 108 nt-1.97□□□□□ -2.72
LSM7P53905 YDR524W-CYDR524W-C 90 nt-1.99□□□□□ -2.73
LSM7P53905 SOM1YEL059C-A 225 nt-2.03□□□□□ -2.73
LSM7P53905 YJL150WYJL150W 303 nt-2.03□□□□□ -2.73
LSM7P53905 YOR316C-AYOR316C-A 210 nt-2.11□□□□□ -2.75
LSM7P53905 YKL106C-AYKL106C-A 120 nt-2.12□□□□□ -2.75
LSM7P53905 YBL053WYBL053W 375 nt-2.12□□□□□ -2.75
LSM7P53905 YCR095W-AYCR095W-A 159 nt-2.13□□□□□ -2.75
LSM7P53905 YBR296C-AYBR296C-A 120 nt-2.25□□□□□ -2.77
LSM7P53905 RPL41AYDL184C 78 nt-2.27□□□□□ -2.77
LSM7P53905 YBR109W-AYBR109W-A 225 nt-2.27□□□□□ -2.77
LSM7P53905 YGR151CYGR151C 336 nt-2.36□□□□□ -2.79
LSM7P53905 YMR046W-AYMR046W-A 129 nt-2.36□□□□□ -2.79
LSM7P53905 YOR309CYOR309C 381 nt-2.37□□□□□ -2.79
LSM7P53905 YOL083C-AYOL083C-A 141 nt-2.39□□□□□ -2.79
LSM7P53905 YBL071C-BYBL071C-B 99 nt-2.43□□□□□ -2.8
LSM7P53905 snR38snR38 95 nt-2.43□□□□□ -2.8
LSM7P53905 YOL164W-AYOL164W-A 183 nt-2.48□□□□□ -2.81
LSM7P53905 SPG3YDR504C 384 nt-2.52□□□□□ -2.81
LSM7P53905 YAL037C-AYAL037C-A 93 nt-2.58□□□□□ -2.82
LSM7P53905 snR47snR47 99 nt-2.59□□□□□ -2.82
LSM7P53905 YCL001W-BYCL001W-B 255 nt-2.6□□□□□ -2.83
LSM7P53905 YBL100W-CYBL100W-C 120 nt-2.64□□□□□ -2.83
LSM7P53905 snR6snR6 112 nt-2.68□□□□□ -2.84
LSM7P53905 tM(CAU)Q1tM(CAU)Q1 76 nt-2.68□□□□□ -2.84
LSM7P53905 YBR126W-BYBR126W-B 144 nt-2.71□□□□□ -2.84
LSM7P53905 YLR466C-BYLR466C-B 117 nt-2.73□□□□□ -2.85
LSM7P53905 YOR335W-AYOR335W-A 81 nt-2.82□□□□□ -2.86
LSM7P53905 RPL41BYDL133C-A 78 nt-2.83□□□□□ -2.86
LSM7P53905 Q0142Q0142 177 nt-2.83□□□□□ -2.86
LSM7P53905 YNL338WYNL338W 159 nt-2.85□□□□□ -2.87
LSM7P53905 YNL337WYNL337W 255 nt-2.86□□□□□ -2.87
LSM7P53905 YKL225WYKL225W 348 nt-2.87□□□□□ -2.87
LSM7P53905 snR73snR73 106 nt-2.88□□□□□ -2.87
LSM7P53905 tS(GCU)Q1tS(GCU)Q1 86 nt-2.91□□□□□ -2.88
LSM7P53905 YDL114W-AYDL114W-A 114 nt-2.94□□□□□ -2.88
LSM7P53905 tV(UAC)QtV(UAC)Q 76 nt-2.98□□□□□ -2.89
LSM7P53905 snR85snR85 171 nt-3.06□□□□□ -2.9
LSM7P53905 YGL041C-BYGL041C-B 183 nt-3.17□□□□□ -2.92
LSM7P53905 YDR034C-AYDR034C-A 177 nt-3.2□□□□□ -2.92
LSM7P53905 YGL007C-AYGL007C-A 87 nt-3.27□□□□□ -2.93
LSM7P53905 snR61snR61 90 nt-3.28□□□□□ -2.93
LSM7P53905 YNL103W-AYNL103W-A 90 nt-3.28□□□□□ -2.93
Retrieved 100 of 7,029 protein–RNA pairs in 48.9 ms