Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.76■□□□□ 0.75
LIMK1P53667 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.76■□□□□ 0.75
LIMK1P53667 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.76■□□□□ 0.75
LIMK1P53667 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.76■□□□□ 0.75
LIMK1P53667 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.76■□□□□ 0.75
LIMK1P53667 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LIMK1P53667 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.76■□□□□ 0.75
LIMK1P53667 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.76■□□□□ 0.75
LIMK1P53667 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
LIMK1P53667 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK1P53667 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK1P53667 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.75■□□□□ 0.75
LIMK1P53667 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK1P53667 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK1P53667 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK1P53667 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK1P53667 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK1P53667 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK1P53667 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK1P53667 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK1P53667 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK1P53667 AC010203.1-204ENST00000548782 407 ntBASIC19.75■□□□□ 0.75
LIMK1P53667 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.75■□□□□ 0.75
LIMK1P53667 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.75■□□□□ 0.75
LIMK1P53667 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.75■□□□□ 0.75
LIMK1P53667 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK1P53667 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK1P53667 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.75■□□□□ 0.75
LIMK1P53667 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK1P53667 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK1P53667 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.74■□□□□ 0.75
LIMK1P53667 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.74■□□□□ 0.75
LIMK1P53667 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.74■□□□□ 0.75
LIMK1P53667 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LIMK1P53667 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK1P53667 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK1P53667 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK1P53667 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
LIMK1P53667 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK1P53667 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LIMK1P53667 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
LIMK1P53667 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.74■□□□□ 0.75
LIMK1P53667 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.74■□□□□ 0.75
LIMK1P53667 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.74■□□□□ 0.75
LIMK1P53667 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK1P53667 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LIMK1P53667 AL358472.4-201ENST00000633140 710 ntBASIC19.74■□□□□ 0.75
LIMK1P53667 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
LIMK1P53667 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.74■□□□□ 0.75
LIMK1P53667 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK1P53667 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK1P53667 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LIMK1P53667 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK1P53667 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.73■□□□□ 0.75
LIMK1P53667 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK1P53667 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK1P53667 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.73■□□□□ 0.75
LIMK1P53667 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.73■□□□□ 0.75
LIMK1P53667 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK1P53667 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK1P53667 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.73■□□□□ 0.75
LIMK1P53667 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK1P53667 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK1P53667 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.73■□□□□ 0.75
LIMK1P53667 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK1P53667 ATP5G1P1-201ENST00000448724 379 ntBASIC19.73■□□□□ 0.75
LIMK1P53667 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK1P53667 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.73■□□□□ 0.75
LIMK1P53667 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
LIMK1P53667 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.73■□□□□ 0.75
LIMK1P53667 AL121894.2-201ENST00000602977 491 ntBASIC19.73■□□□□ 0.75
LIMK1P53667 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.73■□□□□ 0.75
LIMK1P53667 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LIMK1P53667 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK1P53667 AC092667.1-201ENST00000434301 2586 ntBASIC19.73■□□□□ 0.75
LIMK1P53667 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.72■□□□□ 0.75
LIMK1P53667 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LIMK1P53667 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.72■□□□□ 0.75
LIMK1P53667 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.72■□□□□ 0.75
LIMK1P53667 KSR1P1-201ENST00000446298 240 ntBASIC19.72■□□□□ 0.75
LIMK1P53667 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 KRT18P56-201ENST00000507275 550 ntBASIC19.72■□□□□ 0.75
LIMK1P53667 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.72■□□□□ 0.75
LIMK1P53667 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.72■□□□□ 0.75
LIMK1P53667 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LIMK1P53667 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms