Protein–RNA interactions for Protein: P53115

INO80, Chromatin-remodeling ATPase INO80, yeastyeast

Predictions only

Length 1,489 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
INO80P53115 SKI7YOR076C 2244 nt-1.52□□□□□ -2.65
INO80P53115 RDS3YPR094W 324 nt-1.52□□□□□ -2.65
INO80P53115 snR39BsnR39B 96 nt-1.54□□□□□ -2.66
INO80P53115 YDR413CYDR413C 576 nt-1.56□□□□□ -2.66
INO80P53115 YER181CYER181C 324 nt-1.56□□□□□ -2.66
INO80P53115 VAR1Q0140 1197 nt-1.56□□□□□ -2.66
INO80P53115 YOR170WYOR170W 306 nt-1.56□□□□□ -2.66
INO80P53115 tF(GAA)QtF(GAA)Q 75 nt-1.58□□□□□ -2.66
INO80P53115 YDR118W-AYDR118W-A 117 nt-1.59□□□□□ -2.66
INO80P53115 PMP2YEL017C-A 132 nt-1.6□□□□□ -2.67
INO80P53115 YPR012WYPR012W 255 nt-1.6□□□□□ -2.67
INO80P53115 snR55snR55 98 nt-1.63□□□□□ -2.67
INO80P53115 YEL014CYEL014C 306 nt-1.63□□□□□ -2.67
INO80P53115 YNL266WYNL266W 420 nt-1.63□□□□□ -2.67
INO80P53115 GIM4YEL003W 336 nt-1.66□□□□□ -2.68
INO80P53115 snR50snR50 90 nt-1.66□□□□□ -2.68
INO80P53115 YBR131C-AYBR131C-A 90 nt-1.69□□□□□ -2.68
INO80P53115 YNL277W-AYNL277W-A 189 nt-1.72□□□□□ -2.68
INO80P53115 tD(GUC)QtD(GUC)Q 75 nt-1.75□□□□□ -2.69
INO80P53115 Q0142Q0142 177 nt-1.75□□□□□ -2.69
INO80P53115 snR67snR67 82 nt-1.77□□□□□ -2.69
INO80P53115 YDR543CYDR543C 300 nt-1.77□□□□□ -2.69
INO80P53115 YFL019CYFL019C 354 nt-1.78□□□□□ -2.69
INO80P53115 YOR329W-AYOR329W-A 210 nt-1.81□□□□□ -2.7
INO80P53115 JLP2YMR132C 627 nt-1.83□□□□□ -2.7
INO80P53115 YLR286W-AYLR286W-A 135 nt-1.84□□□□□ -2.7
INO80P53115 YNL205CYNL205C 423 nt-1.87□□□□□ -2.71
INO80P53115 YOL155W-AYOL155W-A 135 nt-1.88□□□□□ -2.71
INO80P53115 tP(UGG)QtP(UGG)Q 72 nt-1.92□□□□□ -2.72
INO80P53115 YDL159C-BYDL159C-B 177 nt-1.93□□□□□ -2.72
INO80P53115 YOR102WYOR102W 351 nt-1.99□□□□□ -2.73
INO80P53115 Q0144Q0144 330 nt-2.01□□□□□ -2.73
INO80P53115 YNL097C-BYNL097C-B 123 nt-2.01□□□□□ -2.73
INO80P53115 YBR178WYBR178W 375 nt-2.01□□□□□ -2.73
INO80P53115 YBR126W-BYBR126W-B 144 nt-2.03□□□□□ -2.73
INO80P53115 snR48snR48 113 nt-2.03□□□□□ -2.73
INO80P53115 YLR342W-AYLR342W-A 174 nt-2.05□□□□□ -2.74
INO80P53115 snR65snR65 100 nt-2.06□□□□□ -2.74
INO80P53115 YGL188C-AYGL188C-A 141 nt-2.11□□□□□ -2.75
INO80P53115 tY(GUA)QtY(GUA)Q 84 nt-2.11□□□□□ -2.75
INO80P53115 YML054C-AYML054C-A 159 nt-2.11□□□□□ -2.75
INO80P53115 YOR302WYOR302W 78 nt-2.14□□□□□ -2.75
INO80P53115 YPL152W-AYPL152W-A 99 nt-2.18□□□□□ -2.76
INO80P53115 snR52snR52 92 nt-2.18□□□□□ -2.76
INO80P53115 YLR299C-AYLR299C-A 93 nt-2.2□□□□□ -2.76
INO80P53115 YBR196C-AYBR196C-A 150 nt-2.27□□□□□ -2.77
INO80P53115 tL(UAA)QtL(UAA)Q 85 nt-2.3□□□□□ -2.78
INO80P53115 YHR175W-AYHR175W-A 150 nt-2.3□□□□□ -2.78
INO80P53115 YGR240C-AYGR240C-A 201 nt-2.32□□□□□ -2.78
INO80P53115 YHL015W-AYHL015W-A 84 nt-2.32□□□□□ -2.78
INO80P53115 CDC65tQ(CUG)M 72 nt-2.39□□□□□ -2.79
INO80P53115 YHR180C-BYHR180C-B 105 nt-2.51□□□□□ -2.81
INO80P53115 snR56snR56 88 nt-2.52□□□□□ -2.81
INO80P53115 snR77snR77 88 nt-2.52□□□□□ -2.81
INO80P53115 tR(ACG)Q2tR(ACG)Q2 74 nt-2.52□□□□□ -2.81
INO80P53115 YNL198CYNL198C 303 nt-2.52□□□□□ -2.81
INO80P53115 snR81snR81 201 nt-2.57□□□□□ -2.82
INO80P53115 YOR231C-AYOR231C-A 201 nt-2.59□□□□□ -2.82
INO80P53115 YDR406W-AYDR406W-A 246 nt-2.61□□□□□ -2.83
INO80P53115 YOR376W-AYOR376W-A 156 nt-2.65□□□□□ -2.83
INO80P53115 snR80snR80 171 nt-2.68□□□□□ -2.84
INO80P53115 YMR315W-AYMR315W-A 108 nt-2.68□□□□□ -2.84
INO80P53115 SOM1YEL059C-A 225 nt-2.71□□□□□ -2.84
INO80P53115 YCR095W-AYCR095W-A 159 nt-2.74□□□□□ -2.85
INO80P53115 YDR524W-CYDR524W-C 90 nt-2.74□□□□□ -2.85
INO80P53115 YOR316C-AYOR316C-A 210 nt-2.76□□□□□ -2.85
INO80P53115 YJL150WYJL150W 303 nt-2.77□□□□□ -2.85
INO80P53115 YKL106C-AYKL106C-A 120 nt-2.83□□□□□ -2.86
INO80P53115 RPL41AYDL184C 78 nt-2.97□□□□□ -2.89
INO80P53115 YJR162CYJR162C 351 nt-3□□□□□ -2.89
INO80P53115 YNL337WYNL337W 255 nt-3□□□□□ -2.89
INO80P53115 YBR296C-AYBR296C-A 120 nt-3□□□□□ -2.89
INO80P53115 YMR046W-AYMR046W-A 129 nt-3.09□□□□□ -2.9
INO80P53115 YBR109W-AYBR109W-A 225 nt-3.09□□□□□ -2.9
INO80P53115 YBL053WYBL053W 375 nt-3.13□□□□□ -2.91
INO80P53115 YGR151CYGR151C 336 nt-3.18□□□□□ -2.92
INO80P53115 YOR309CYOR309C 381 nt-3.21□□□□□ -2.92
INO80P53115 YOL083C-AYOL083C-A 141 nt-3.28□□□□□ -2.94
INO80P53115 YOL164W-AYOL164W-A 183 nt-3.31□□□□□ -2.94
INO80P53115 YBL071C-BYBL071C-B 99 nt-3.35□□□□□ -2.94
INO80P53115 snR38snR38 95 nt-3.37□□□□□ -2.95
INO80P53115 YBL100W-CYBL100W-C 120 nt-3.42□□□□□ -2.96
INO80P53115 YAL037C-AYAL037C-A 93 nt-3.44□□□□□ -2.96
INO80P53115 SPG3YDR504C 384 nt-3.45□□□□□ -2.96
INO80P53115 snR47snR47 99 nt-3.47□□□□□ -2.97
INO80P53115 tM(CAU)Q1tM(CAU)Q1 76 nt-3.51□□□□□ -2.97
INO80P53115 YCL001W-BYCL001W-B 255 nt-3.59□□□□□ -2.98
INO80P53115 snR6snR6 112 nt-3.66□□□□□ -2.99
INO80P53115 RPL41BYDL133C-A 78 nt-3.66□□□□□ -2.99
INO80P53115 YDR524C-AYDR524C-A 120 nt-3.67□□□□□ -3
INO80P53115 YLR466C-BYLR466C-B 117 nt-3.71□□□□□ -3
INO80P53115 YKL225WYKL225W 348 nt-3.84□□□□□ -3.02
INO80P53115 YOR335W-AYOR335W-A 81 nt-3.89□□□□□ -3.03
INO80P53115 YDL114W-AYDL114W-A 114 nt-3.91□□□□□ -3.03
INO80P53115 YNL338WYNL338W 159 nt-3.92□□□□□ -3.04
INO80P53115 snR73snR73 106 nt-3.94□□□□□ -3.04
INO80P53115 snR85snR85 171 nt-3.98□□□□□ -3.05
INO80P53115 tS(GCU)Q1tS(GCU)Q1 86 nt-3.99□□□□□ -3.05
INO80P53115 tV(UAC)QtV(UAC)Q 76 nt-4.01□□□□□ -3.05
INO80P53115 YDR034C-AYDR034C-A 177 nt-4.28□□□□□ -3.09
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms