Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.72■■□□□ 1.07
CDR1P51861 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.72■■□□□ 1.07
CDR1P51861 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.72■■□□□ 1.07
CDR1P51861 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CDR1P51861 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDR1P51861 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDR1P51861 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDR1P51861 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.72■■□□□ 1.07
CDR1P51861 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.72■■□□□ 1.07
CDR1P51861 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDR1P51861 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDR1P51861 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.72■■□□□ 1.07
CDR1P51861 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDR1P51861 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDR1P51861 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDR1P51861 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDR1P51861 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDR1P51861 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDR1P51861 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.71■■□□□ 1.07
CDR1P51861 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDR1P51861 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.71■■□□□ 1.07
CDR1P51861 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDR1P51861 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.71■■□□□ 1.07
CDR1P51861 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDR1P51861 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CDR1P51861 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.71■■□□□ 1.07
CDR1P51861 AC100791.3-201ENST00000617619 330 ntBASIC21.71■■□□□ 1.07
CDR1P51861 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDR1P51861 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDR1P51861 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDR1P51861 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDR1P51861 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDR1P51861 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
CDR1P51861 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDR1P51861 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDR1P51861 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.7■■□□□ 1.07
CDR1P51861 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.07
CDR1P51861 FEM1AP1-201ENST00000431297 1995 ntBASIC21.7■■□□□ 1.07
CDR1P51861 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CDR1P51861 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDR1P51861 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDR1P51861 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDR1P51861 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDR1P51861 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDR1P51861 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.7■■□□□ 1.06
CDR1P51861 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.7■■□□□ 1.06
CDR1P51861 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDR1P51861 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.7■■□□□ 1.06
CDR1P51861 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.7■■□□□ 1.06
CDR1P51861 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.7■■□□□ 1.06
CDR1P51861 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDR1P51861 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDR1P51861 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CDR1P51861 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDR1P51861 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDR1P51861 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDR1P51861 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDR1P51861 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDR1P51861 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDR1P51861 AC121338.2-201ENST00000622535 1744 ntBASIC21.69■■□□□ 1.06
CDR1P51861 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDR1P51861 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.69■■□□□ 1.06
CDR1P51861 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDR1P51861 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDR1P51861 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDR1P51861 PRORSD1P-201ENST00000295112 541 ntBASIC21.69■■□□□ 1.06
CDR1P51861 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDR1P51861 KRT18P29-201ENST00000397031 1267 ntBASIC21.69■■□□□ 1.06
CDR1P51861 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.69■■□□□ 1.06
CDR1P51861 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDR1P51861 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.69■■□□□ 1.06
CDR1P51861 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.69■■□□□ 1.06
CDR1P51861 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDR1P51861 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.69■■□□□ 1.06
CDR1P51861 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDR1P51861 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CDR1P51861 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDR1P51861 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.69■■□□□ 1.06
CDR1P51861 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDR1P51861 AC011484.1-201ENST00000377652 1995 ntBASIC21.68■■□□□ 1.06
CDR1P51861 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
CDR1P51861 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.68■■□□□ 1.06
CDR1P51861 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.68■■□□□ 1.06
CDR1P51861 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDR1P51861 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDR1P51861 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDR1P51861 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDR1P51861 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDR1P51861 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDR1P51861 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.68■■□□□ 1.06
CDR1P51861 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CDR1P51861 AC006058.3-201ENST00000606217 1069 ntBASIC21.68■■□□□ 1.06
CDR1P51861 AC105020.6-201ENST00000621523 1217 ntBASIC21.68■■□□□ 1.06
CDR1P51861 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDR1P51861 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CDR1P51861 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDR1P51861 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDR1P51861 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.68■■□□□ 1.06
CDR1P51861 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDR1P51861 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms