Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
USP11P51784 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP11P51784 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
USP11P51784 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.58■■□□□ 1.21
USP11P51784 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
USP11P51784 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
USP11P51784 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.58■■□□□ 1.2
USP11P51784 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP11P51784 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP11P51784 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP11P51784 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
USP11P51784 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.57■■□□□ 1.2
USP11P51784 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.57■■□□□ 1.2
USP11P51784 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP11P51784 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP11P51784 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP11P51784 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.57■■□□□ 1.2
USP11P51784 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.57■■□□□ 1.2
USP11P51784 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.57■■□□□ 1.2
USP11P51784 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP11P51784 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.57■■□□□ 1.2
USP11P51784 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP11P51784 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.57■■□□□ 1.2
USP11P51784 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP11P51784 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.57■■□□□ 1.2
USP11P51784 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP11P51784 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.57■■□□□ 1.2
USP11P51784 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP11P51784 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP11P51784 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP11P51784 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP11P51784 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP11P51784 PRORSD1P-201ENST00000295112 541 ntBASIC22.56■■□□□ 1.2
USP11P51784 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP11P51784 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
USP11P51784 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP11P51784 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.56■■□□□ 1.2
USP11P51784 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP11P51784 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.56■■□□□ 1.2
USP11P51784 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.56■■□□□ 1.2
USP11P51784 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.56■■□□□ 1.2
USP11P51784 AL121906.2-201ENST00000621597 723 ntBASIC22.56■■□□□ 1.2
USP11P51784 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP11P51784 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP11P51784 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP11P51784 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP11P51784 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.56■■□□□ 1.2
USP11P51784 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP11P51784 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.56■■□□□ 1.2
USP11P51784 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP11P51784 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.56■■□□□ 1.2
USP11P51784 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP11P51784 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP11P51784 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
USP11P51784 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP11P51784 AC073130.3-201ENST00000624389 2278 ntBASIC22.55■■□□□ 1.2
USP11P51784 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP11P51784 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
USP11P51784 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP11P51784 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP11P51784 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP11P51784 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.55■■□□□ 1.2
USP11P51784 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.55■■□□□ 1.2
USP11P51784 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.55■■□□□ 1.2
USP11P51784 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.55■■□□□ 1.2
USP11P51784 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP11P51784 PHGDH-210ENST00000641115 1638 ntBASIC22.55■■□□□ 1.2
USP11P51784 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP11P51784 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP11P51784 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.55■■□□□ 1.2
USP11P51784 AC116351.2-201ENST00000606540 1585 ntBASIC22.55■■□□□ 1.2
USP11P51784 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP11P51784 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP11P51784 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP11P51784 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.54■■□□□ 1.2
USP11P51784 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.54■■□□□ 1.2
USP11P51784 AL391422.3-201ENST00000603791 2761 ntBASIC22.54■■□□□ 1.2
USP11P51784 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.54■■□□□ 1.2
USP11P51784 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP11P51784 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP11P51784 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP11P51784 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.54■■□□□ 1.2
USP11P51784 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.54■■□□□ 1.2
USP11P51784 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.54■■□□□ 1.2
USP11P51784 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.54■■□□□ 1.2
USP11P51784 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP11P51784 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP11P51784 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
USP11P51784 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
USP11P51784 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP11P51784 AL691432.2-201ENST00000607222 2038 ntBASIC22.53■■□□□ 1.2
USP11P51784 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP11P51784 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP11P51784 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.53■■□□□ 1.2
USP11P51784 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
USP11P51784 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
USP11P51784 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.53■■□□□ 1.2
USP11P51784 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.53■■□□□ 1.2
USP11P51784 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.53■■□□□ 1.2
USP11P51784 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms