Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLK1P49759 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK1P49759 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLK1P49759 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
CLK1P49759 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLK1P49759 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLK1P49759 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.65■□□□□ 0.58
CLK1P49759 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.65■□□□□ 0.58
CLK1P49759 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK1P49759 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK1P49759 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK1P49759 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.65■□□□□ 0.58
CLK1P49759 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLK1P49759 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK1P49759 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK1P49759 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLK1P49759 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK1P49759 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLK1P49759 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK1P49759 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK1P49759 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLK1P49759 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLK1P49759 AC011484.1-201ENST00000377652 1995 ntBASIC18.64■□□□□ 0.58
CLK1P49759 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.64■□□□□ 0.57
CLK1P49759 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK1P49759 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK1P49759 AC116050.2-201ENST00000612102 1779 ntBASIC18.64■□□□□ 0.57
CLK1P49759 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLK1P49759 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK1P49759 AC091799.1-201ENST00000422823 811 ntBASIC18.64■□□□□ 0.57
CLK1P49759 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.64■□□□□ 0.57
CLK1P49759 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLK1P49759 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.64■□□□□ 0.57
CLK1P49759 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLK1P49759 MFSD11-216ENST00000590393 1141 ntBASIC18.64■□□□□ 0.57
CLK1P49759 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLK1P49759 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CLK1P49759 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.64■□□□□ 0.57
CLK1P49759 AC011767.1-201ENST00000617410 1153 ntBASIC18.64■□□□□ 0.57
CLK1P49759 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK1P49759 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK1P49759 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.64■□□□□ 0.57
CLK1P49759 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLK1P49759 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.64■□□□□ 0.57
CLK1P49759 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.64■□□□□ 0.57
CLK1P49759 AL512408.1-201ENST00000569378 2000 ntBASIC18.64■□□□□ 0.57
CLK1P49759 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.64■□□□□ 0.57
CLK1P49759 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.64■□□□□ 0.57
CLK1P49759 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.64■□□□□ 0.57
CLK1P49759 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.64■□□□□ 0.57
CLK1P49759 AC121338.2-201ENST00000622535 1744 ntBASIC18.63■□□□□ 0.57
CLK1P49759 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK1P49759 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLK1P49759 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.63■□□□□ 0.57
CLK1P49759 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CLK1P49759 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK1P49759 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK1P49759 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK1P49759 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.63■□□□□ 0.57
CLK1P49759 CDV3P1-201ENST00000471403 739 ntBASIC18.63■□□□□ 0.57
CLK1P49759 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CLK1P49759 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.63■□□□□ 0.57
CLK1P49759 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLK1P49759 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.63■□□□□ 0.57
CLK1P49759 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK1P49759 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK1P49759 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLK1P49759 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK1P49759 AL162377.1-201ENST00000618844 1793 ntBASIC18.63■□□□□ 0.57
CLK1P49759 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLK1P49759 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
CLK1P49759 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLK1P49759 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK1P49759 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK1P49759 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.62■□□□□ 0.57
CLK1P49759 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.62■□□□□ 0.57
CLK1P49759 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.62■□□□□ 0.57
CLK1P49759 AL591742.1-201ENST00000604433 565 ntBASIC18.62■□□□□ 0.57
CLK1P49759 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.62■□□□□ 0.57
CLK1P49759 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CLK1P49759 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK1P49759 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.62■□□□□ 0.57
CLK1P49759 AC099778.1-201ENST00000568593 1911 ntBASIC18.62■□□□□ 0.57
CLK1P49759 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK1P49759 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK1P49759 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLK1P49759 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK1P49759 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK1P49759 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK1P49759 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK1P49759 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK1P49759 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK1P49759 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLK1P49759 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLK1P49759 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLK1P49759 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLK1P49759 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.61■□□□□ 0.57
CLK1P49759 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.61■□□□□ 0.57
CLK1P49759 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLK1P49759 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms