Protein–RNA interactions for Protein: P48016

ATH1, Vacuolar acid trehalase, yeastyeast

Predictions only

Length 1,211 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATH1P48016 SPC110YDR356W 2835 nt1.96□□□□□ -2.1
ATH1P48016 BST1YFL025C 3090 nt1.96□□□□□ -2.1
ATH1P48016 LAA1YJL207C 6045 nt1.96□□□□□ -2.1
ATH1P48016 YMR247W-AYMR247W-A 144 nt1.93□□□□□ -2.1
ATH1P48016 YMR045CYMR045C 5268 nt1.92□□□□□ -2.1
ATH1P48016 YHR214C-BYHR214C-B 5382 nt1.92□□□□□ -2.1
ATH1P48016 YNL054W-BYNL054W-B 5250 nt1.92□□□□□ -2.1
ATH1P48016 FIG2YCR089W 4830 nt1.92□□□□□ -2.1
ATH1P48016 FKS1YLR342W 5631 nt1.92□□□□□ -2.1
ATH1P48016 YOR376W-AYOR376W-A 156 nt1.88□□□□□ -2.11
ATH1P48016 CFT1YDR301W 4074 nt1.88□□□□□ -2.11
ATH1P48016 SPT7YBR081C 3999 nt1.88□□□□□ -2.11
ATH1P48016 YGR130CYGR130C 2451 nt1.85□□□□□ -2.11
ATH1P48016 tT(UGU)HtT(UGU)H 72 nt1.85□□□□□ -2.11
ATH1P48016 YMR272W-BYMR272W-B 108 nt1.85□□□□□ -2.11
ATH1P48016 MLP2YIL149C 5040 nt1.84□□□□□ -2.11
ATH1P48016 YOR093CYOR093C 4947 nt1.83□□□□□ -2.12
ATH1P48016 YDL114W-AYDL114W-A 114 nt1.83□□□□□ -2.12
ATH1P48016 YNL284C-BYNL284C-B 5268 nt1.8□□□□□ -2.12
ATH1P48016 snR67snR67 82 nt1.8□□□□□ -2.12
ATH1P48016 DNF3YMR162C 4971 nt1.8□□□□□ -2.12
ATH1P48016 CCH1YGR217W 6120 nt1.77□□□□□ -2.13
ATH1P48016 tV(UAC)QtV(UAC)Q 76 nt1.77□□□□□ -2.13
ATH1P48016 BRR2YER172C 6492 nt1.75□□□□□ -2.13
ATH1P48016 VPS15YBR097W 4365 nt1.75□□□□□ -2.13
ATH1P48016 MEC1YBR136W 7107 nt1.69□□□□□ -2.14
ATH1P48016 YKL106C-AYKL106C-A 120 nt1.69□□□□□ -2.14
ATH1P48016 VAM6YDL077C 3150 nt1.67□□□□□ -2.14
ATH1P48016 SSK2YNR031C 4740 nt1.66□□□□□ -2.14
ATH1P48016 YPR117WYPR117W 7470 nt1.63□□□□□ -2.15
ATH1P48016 YMR160WYMR160W 2451 nt1.62□□□□□ -2.15
ATH1P48016 snR40snR40 97 nt1.6□□□□□ -2.15
ATH1P48016 YOR192C-BYOR192C-B 5313 nt1.55□□□□□ -2.16
ATH1P48016 IML1YJR138W 4755 nt1.52□□□□□ -2.17
ATH1P48016 IRA1YBR140C 9279 nt1.51□□□□□ -2.17
ATH1P48016 RKR1YMR247C 4689 nt1.48□□□□□ -2.17
ATH1P48016 tQ(UUG)E2tQ(UUG)E2 72 nt1.45□□□□□ -2.18
ATH1P48016 LTE1YAL024C 4308 nt1.44□□□□□ -2.18
ATH1P48016 PAU24YBR301W 363 nt1.43□□□□□ -2.18
ATH1P48016 YBL100W-BYBL100W-B 5313 nt1.41□□□□□ -2.18
ATH1P48016 MYO1YHR023W 5787 nt1.39□□□□□ -2.19
ATH1P48016 tH(GUG)E1tH(GUG)E1 72 nt1.39□□□□□ -2.19
ATH1P48016 tH(GUG)E2tH(GUG)E2 72 nt1.39□□□□□ -2.19
ATH1P48016 tH(GUG)G1tH(GUG)G1 72 nt1.39□□□□□ -2.19
ATH1P48016 tH(GUG)G2tH(GUG)G2 72 nt1.39□□□□□ -2.19
ATH1P48016 tH(GUG)HtH(GUG)H 72 nt1.39□□□□□ -2.19
ATH1P48016 tH(GUG)KtH(GUG)K 72 nt1.39□□□□□ -2.19
ATH1P48016 tH(GUG)MtH(GUG)M 72 nt1.39□□□□□ -2.19
ATH1P48016 HKR1YDR420W 5409 nt1.39□□□□□ -2.19
ATH1P48016 SCC2YDR180W 4482 nt1.38□□□□□ -2.19
ATH1P48016 tV(UAC)BtV(UAC)B 74 nt1.35□□□□□ -2.19
ATH1P48016 tV(UAC)DtV(UAC)D 74 nt1.35□□□□□ -2.19
ATH1P48016 BUD3YCL014W 4911 nt1.35□□□□□ -2.19
ATH1P48016 YOR316C-AYOR316C-A 210 nt1.3□□□□□ -2.2
ATH1P48016 snR77snR77 88 nt1.29□□□□□ -2.2
ATH1P48016 DOP1YDR141C 5097 nt1.25□□□□□ -2.21
ATH1P48016 UTP20YBL004W 7482 nt1.24□□□□□ -2.21
ATH1P48016 YJR029WYJR029W 5268 nt1.21□□□□□ -2.22
ATH1P48016 YML100W-AYML100W-A 174 nt1.21□□□□□ -2.22
ATH1P48016 YPR137C-BYPR137C-B 5268 nt1.21□□□□□ -2.22
ATH1P48016 MLP1YKR095W 5628 nt1.19□□□□□ -2.22
ATH1P48016 tF(GAA)BtF(GAA)B 73 nt1.19□□□□□ -2.22
ATH1P48016 tF(GAA)FtF(GAA)F 73 nt1.19□□□□□ -2.22
ATH1P48016 tF(GAA)GtF(GAA)G 73 nt1.19□□□□□ -2.22
ATH1P48016 tF(GAA)H1tF(GAA)H1 73 nt1.19□□□□□ -2.22
ATH1P48016 tF(GAA)H2tF(GAA)H2 73 nt1.19□□□□□ -2.22
ATH1P48016 tF(GAA)MtF(GAA)M 73 nt1.19□□□□□ -2.22
ATH1P48016 tF(GAA)P1tF(GAA)P1 73 nt1.19□□□□□ -2.22
ATH1P48016 tF(GAA)P2tF(GAA)P2 73 nt1.19□□□□□ -2.22
ATH1P48016 IQG1YPL242C 4488 nt1.18□□□□□ -2.22
ATH1P48016 BEM2YER155C 6504 nt1.17□□□□□ -2.22
ATH1P48016 SBH2YER019C-A 267 nt1.17□□□□□ -2.22
ATH1P48016 SOV1YMR066W 2697 nt1.09□□□□□ -2.24
ATH1P48016 YOR186C-AYOR186C-A 210 nt1.06□□□□□ -2.24
ATH1P48016 YOL014WYOL014W 375 nt1□□□□□ -2.25
ATH1P48016 ESP1YGR098C 4893 nt0.99□□□□□ -2.25
ATH1P48016 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
ATH1P48016 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
ATH1P48016 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
ATH1P48016 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
ATH1P48016 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
ATH1P48016 YJL113WYJL113W 4647 nt0.95□□□□□ -2.26
ATH1P48016 FMP27YLR454W 7887 nt0.85□□□□□ -2.27
ATH1P48016 YKL145W-AYKL145W-A 93 nt0.84□□□□□ -2.27
ATH1P48016 THO2YNL139C 4794 nt0.77□□□□□ -2.29
ATH1P48016 tT(AGU)BtT(AGU)B 73 nt0.77□□□□□ -2.29
ATH1P48016 tT(AGU)CtT(AGU)C 73 nt0.77□□□□□ -2.29
ATH1P48016 tT(AGU)DtT(AGU)D 73 nt0.77□□□□□ -2.29
ATH1P48016 tT(AGU)HtT(AGU)H 73 nt0.77□□□□□ -2.29
ATH1P48016 tT(AGU)I1tT(AGU)I1 73 nt0.77□□□□□ -2.29
ATH1P48016 tT(AGU)I2tT(AGU)I2 73 nt0.77□□□□□ -2.29
ATH1P48016 tT(AGU)JtT(AGU)J 73 nt0.77□□□□□ -2.29
ATH1P48016 tT(AGU)N1tT(AGU)N1 73 nt0.77□□□□□ -2.29
ATH1P48016 tT(AGU)N2tT(AGU)N2 73 nt0.77□□□□□ -2.29
ATH1P48016 tT(AGU)O1tT(AGU)O1 73 nt0.77□□□□□ -2.29
ATH1P48016 tT(AGU)O2tT(AGU)O2 73 nt0.77□□□□□ -2.29
ATH1P48016 YPR159C-AYPR159C-A 102 nt0.77□□□□□ -2.29
ATH1P48016 PAU9YBL108C-A 129 nt0.72□□□□□ -2.29
ATH1P48016 YMR272W-AYMR272W-A 114 nt0.71□□□□□ -2.3
ATH1P48016 UTP10YJL109C 5310 nt0.66□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms