Protein–RNA interactions for Protein: P47138

JJJ3, Diphthamide biosynthesis protein 4, yeastyeast

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
JJJ3P47138 IRA1YBR140C 9279 nt1.62□□□□□ -2.15
JJJ3P47138 TRM732YMR259C 4263 nt1.61□□□□□ -2.15
JJJ3P47138 SWI4YER111C 3282 nt1.61□□□□□ -2.15
JJJ3P47138 YLL006W-AYLL006W-A 177 nt1.61□□□□□ -2.15
JJJ3P47138 TMA7YLR262C-A 195 nt1.61□□□□□ -2.15
JJJ3P47138 NUP188YML103C 4968 nt1.6□□□□□ -2.15
JJJ3P47138 YOR376W-AYOR376W-A 156 nt1.59□□□□□ -2.15
JJJ3P47138 MSN5YDR335W 3675 nt1.59□□□□□ -2.16
JJJ3P47138 YCS4YLR272C 3531 nt1.57□□□□□ -2.16
JJJ3P47138 YGR130CYGR130C 2451 nt1.57□□□□□ -2.16
JJJ3P47138 NUP145YGL092W 3954 nt1.56□□□□□ -2.16
JJJ3P47138 VPS15YBR097W 4365 nt1.56□□□□□ -2.16
JJJ3P47138 YER090C-AYER090C-A 90 nt1.55□□□□□ -2.16
JJJ3P47138 SSK2YNR031C 4740 nt1.55□□□□□ -2.16
JJJ3P47138 YNL054W-BYNL054W-B 5250 nt1.53□□□□□ -2.16
JJJ3P47138 IML1YJR138W 4755 nt1.53□□□□□ -2.16
JJJ3P47138 CDC25YLR310C 4770 nt1.52□□□□□ -2.17
JJJ3P47138 YDL114W-AYDL114W-A 114 nt1.52□□□□□ -2.17
JJJ3P47138 CDC39YCR093W 6327 nt1.51□□□□□ -2.17
JJJ3P47138 CCH1YGR217W 6120 nt1.48□□□□□ -2.17
JJJ3P47138 CLU1YMR012W 3834 nt1.46□□□□□ -2.18
JJJ3P47138 tH(GUG)E1tH(GUG)E1 72 nt1.45□□□□□ -2.18
JJJ3P47138 tH(GUG)E2tH(GUG)E2 72 nt1.45□□□□□ -2.18
JJJ3P47138 tH(GUG)G1tH(GUG)G1 72 nt1.45□□□□□ -2.18
JJJ3P47138 tH(GUG)G2tH(GUG)G2 72 nt1.45□□□□□ -2.18
JJJ3P47138 tH(GUG)HtH(GUG)H 72 nt1.45□□□□□ -2.18
JJJ3P47138 tH(GUG)KtH(GUG)K 72 nt1.45□□□□□ -2.18
JJJ3P47138 tH(GUG)MtH(GUG)M 72 nt1.45□□□□□ -2.18
JJJ3P47138 BST1YFL025C 3090 nt1.45□□□□□ -2.18
JJJ3P47138 HKR1YDR420W 5409 nt1.44□□□□□ -2.18
JJJ3P47138 tV(UAC)QtV(UAC)Q 76 nt1.43□□□□□ -2.18
JJJ3P47138 tT(UGU)HtT(UGU)H 72 nt1.42□□□□□ -2.18
JJJ3P47138 snR40snR40 97 nt1.42□□□□□ -2.18
JJJ3P47138 snR67snR67 82 nt1.41□□□□□ -2.18
JJJ3P47138 YMR247W-AYMR247W-A 144 nt1.4□□□□□ -2.19
JJJ3P47138 SPC110YDR356W 2835 nt1.4□□□□□ -2.19
JJJ3P47138 YNL284C-BYNL284C-B 5268 nt1.38□□□□□ -2.19
JJJ3P47138 YKL106C-AYKL106C-A 120 nt1.38□□□□□ -2.19
JJJ3P47138 SPT7YBR081C 3999 nt1.38□□□□□ -2.19
JJJ3P47138 tV(UAC)BtV(UAC)B 74 nt1.37□□□□□ -2.19
JJJ3P47138 tV(UAC)DtV(UAC)D 74 nt1.37□□□□□ -2.19
JJJ3P47138 BUD3YCL014W 4911 nt1.37□□□□□ -2.19
JJJ3P47138 tQ(UUG)E2tQ(UUG)E2 72 nt1.34□□□□□ -2.19
JJJ3P47138 YOR192C-BYOR192C-B 5313 nt1.34□□□□□ -2.2
JJJ3P47138 YMR160WYMR160W 2451 nt1.31□□□□□ -2.2
JJJ3P47138 VAM6YDL077C 3150 nt1.28□□□□□ -2.2
JJJ3P47138 RKR1YMR247C 4689 nt1.25□□□□□ -2.21
JJJ3P47138 YJR029WYJR029W 5268 nt1.22□□□□□ -2.21
JJJ3P47138 YPR137C-BYPR137C-B 5268 nt1.22□□□□□ -2.21
JJJ3P47138 YPR117WYPR117W 7470 nt1.18□□□□□ -2.22
JJJ3P47138 MLP2YIL149C 5040 nt1.14□□□□□ -2.23
JJJ3P47138 LTE1YAL024C 4308 nt1.11□□□□□ -2.23
JJJ3P47138 snR77snR77 88 nt1.08□□□□□ -2.24
JJJ3P47138 UTP20YBL004W 7482 nt1.05□□□□□ -2.24
JJJ3P47138 PAU24YBR301W 363 nt1.04□□□□□ -2.24
JJJ3P47138 THO2YNL139C 4794 nt1.02□□□□□ -2.25
JJJ3P47138 YOR316C-AYOR316C-A 210 nt1.02□□□□□ -2.25
JJJ3P47138 YBL100W-BYBL100W-B 5313 nt0.99□□□□□ -2.25
JJJ3P47138 SCC2YDR180W 4482 nt0.95□□□□□ -2.26
JJJ3P47138 SBH2YER019C-A 267 nt0.95□□□□□ -2.26
JJJ3P47138 tF(GAA)BtF(GAA)B 73 nt0.92□□□□□ -2.26
JJJ3P47138 tF(GAA)FtF(GAA)F 73 nt0.92□□□□□ -2.26
JJJ3P47138 tF(GAA)GtF(GAA)G 73 nt0.92□□□□□ -2.26
JJJ3P47138 tF(GAA)H1tF(GAA)H1 73 nt0.92□□□□□ -2.26
JJJ3P47138 tF(GAA)H2tF(GAA)H2 73 nt0.92□□□□□ -2.26
JJJ3P47138 tF(GAA)MtF(GAA)M 73 nt0.92□□□□□ -2.26
JJJ3P47138 tF(GAA)P1tF(GAA)P1 73 nt0.92□□□□□ -2.26
JJJ3P47138 tF(GAA)P2tF(GAA)P2 73 nt0.92□□□□□ -2.26
JJJ3P47138 SOV1YMR066W 2697 nt0.92□□□□□ -2.26
JJJ3P47138 BEM2YER155C 6504 nt0.89□□□□□ -2.27
JJJ3P47138 YML100W-AYML100W-A 174 nt0.89□□□□□ -2.27
JJJ3P47138 DOP1YDR141C 5097 nt0.85□□□□□ -2.27
JJJ3P47138 tT(AGU)BtT(AGU)B 73 nt0.8□□□□□ -2.28
JJJ3P47138 tT(AGU)CtT(AGU)C 73 nt0.8□□□□□ -2.28
JJJ3P47138 tT(AGU)DtT(AGU)D 73 nt0.8□□□□□ -2.28
JJJ3P47138 tT(AGU)HtT(AGU)H 73 nt0.8□□□□□ -2.28
JJJ3P47138 tT(AGU)I1tT(AGU)I1 73 nt0.8□□□□□ -2.28
JJJ3P47138 tT(AGU)I2tT(AGU)I2 73 nt0.8□□□□□ -2.28
JJJ3P47138 tT(AGU)JtT(AGU)J 73 nt0.8□□□□□ -2.28
JJJ3P47138 tT(AGU)N1tT(AGU)N1 73 nt0.8□□□□□ -2.28
JJJ3P47138 tT(AGU)N2tT(AGU)N2 73 nt0.8□□□□□ -2.28
JJJ3P47138 tT(AGU)O1tT(AGU)O1 73 nt0.8□□□□□ -2.28
JJJ3P47138 tT(AGU)O2tT(AGU)O2 73 nt0.8□□□□□ -2.28
JJJ3P47138 EMT1tM(CAU)D 73 nt0.78□□□□□ -2.28
JJJ3P47138 EMT5tM(CAU)J1 73 nt0.78□□□□□ -2.28
JJJ3P47138 EMT3tM(CAU)J2 73 nt0.78□□□□□ -2.28
JJJ3P47138 EMT4tM(CAU)M 73 nt0.78□□□□□ -2.28
JJJ3P47138 EMT2tM(CAU)O2 73 nt0.78□□□□□ -2.28
JJJ3P47138 YOR186C-AYOR186C-A 210 nt0.76□□□□□ -2.29
JJJ3P47138 MLP1YKR095W 5628 nt0.74□□□□□ -2.29
JJJ3P47138 YOL014WYOL014W 375 nt0.74□□□□□ -2.29
JJJ3P47138 IQG1YPL242C 4488 nt0.74□□□□□ -2.29
JJJ3P47138 PAU9YBL108C-A 129 nt0.71□□□□□ -2.3
JJJ3P47138 ESP1YGR098C 4893 nt0.7□□□□□ -2.3
JJJ3P47138 YKL145W-AYKL145W-A 93 nt0.7□□□□□ -2.3
JJJ3P47138 UTP10YJL109C 5310 nt0.65□□□□□ -2.31
JJJ3P47138 FMP27YLR454W 7887 nt0.62□□□□□ -2.31
JJJ3P47138 YPR159C-AYPR159C-A 102 nt0.6□□□□□ -2.31
JJJ3P47138 YMR272W-AYMR272W-A 114 nt0.56□□□□□ -2.32
JJJ3P47138 snR128snR128 126 nt0.56□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 26.6 ms