Protein–RNA interactions for Protein: P47101

YJR030C, UPF0508 protein YJR030C, yeastyeast

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJR030CP47101 tM(CAU)Q2tM(CAU)Q2 78 nt0.3□□□□□ -2.36
YJR030CP47101 YBL053WYBL053W 375 nt0.3□□□□□ -2.36
YJR030CP47101 YNL338WYNL338W 159 nt0.3□□□□□ -2.36
YJR030CP47101 YOR102WYOR102W 351 nt0.3□□□□□ -2.36
YJR030CP47101 GLG1YKR058W 1851 nt0.3□□□□□ -2.36
YJR030CP47101 CSE1YGL238W 2883 nt0.3□□□□□ -2.36
YJR030CP47101 RCO1YMR075W 2055 nt0.28□□□□□ -2.36
YJR030CP47101 tL(UAA)QtL(UAA)Q 85 nt0.28□□□□□ -2.36
YJR030CP47101 snR39BsnR39B 96 nt0.28□□□□□ -2.36
YJR030CP47101 snR48snR48 113 nt0.28□□□□□ -2.36
YJR030CP47101 YNL054W-BYNL054W-B 5250 nt0.24□□□□□ -2.37
YJR030CP47101 YBL100W-BYBL100W-B 5313 nt0.23□□□□□ -2.37
YJR030CP47101 YDL007C-AYDL007C-A 258 nt0.23□□□□□ -2.37
YJR030CP47101 YGL007C-AYGL007C-A 87 nt0.23□□□□□ -2.37
YJR030CP47101 Q0032Q0032 291 nt0.22□□□□□ -2.37
YJR030CP47101 YNL067W-BYNL067W-B 141 nt0.22□□□□□ -2.37
YJR030CP47101 RPM2YML091C 3609 nt0.21□□□□□ -2.38
YJR030CP47101 YOL013W-AYOL013W-A 192 nt0.21□□□□□ -2.38
YJR030CP47101 YBR099CYBR099C 384 nt0.19□□□□□ -2.38
YJR030CP47101 YOR186C-AYOR186C-A 210 nt0.18□□□□□ -2.38
YJR030CP47101 YGR146C-AYGR146C-A 162 nt0.17□□□□□ -2.38
YJR030CP47101 YOR225WYOR225W 330 nt0.17□□□□□ -2.38
YJR030CP47101 EST1YLR233C 2100 nt0.14□□□□□ -2.39
YJR030CP47101 YLR294CYLR294C 330 nt0.13□□□□□ -2.39
YJR030CP47101 PMP2YEL017C-A 132 nt0.12□□□□□ -2.39
YJR030CP47101 snR45snR45 172 nt0.12□□□□□ -2.39
YJR030CP47101 snR69snR69 101 nt0.11□□□□□ -2.39
YJR030CP47101 YNL205CYNL205C 423 nt0.11□□□□□ -2.39
YJR030CP47101 SOV1YMR066W 2697 nt0.1□□□□□ -2.39
YJR030CP47101 SOM1YEL059C-A 225 nt0.09□□□□□ -2.4
YJR030CP47101 tQ(UUG)QtQ(UUG)Q 76 nt0.09□□□□□ -2.4
YJR030CP47101 YPL060C-AYPL060C-A 3315 nt0.09□□□□□ -2.4
YJR030CP47101 YJL077W-AYJL077W-A 87 nt0.07□□□□□ -2.4
YJR030CP47101 YGR164WYGR164W 336 nt0.06□□□□□ -2.4
YJR030CP47101 SEC10YLR166C 2616 nt0.05□□□□□ -2.4
YJR030CP47101 YIL071W-AYIL071W-A 477 nt0.05□□□□□ -2.4
YJR030CP47101 YBR178WYBR178W 375 nt0.05□□□□□ -2.4
YJR030CP47101 YCL001W-BYCL001W-B 255 nt0.05□□□□□ -2.4
YJR030CP47101 YCR095W-AYCR095W-A 159 nt0.04□□□□□ -2.4
YJR030CP47101 tD(GUC)QtD(GUC)Q 75 nt0.04□□□□□ -2.4
YJR030CP47101 YNL266WYNL266W 420 nt0.04□□□□□ -2.4
YJR030CP47101 snR128snR128 126 nt0.04□□□□□ -2.4
YJR030CP47101 RDS3YPR094W 324 nt0.04□□□□□ -2.4
YJR030CP47101 YBR196C-AYBR196C-A 150 nt-0.01□□□□□ -2.41
YJR030CP47101 snR50snR50 90 nt-0.01□□□□□ -2.41
YJR030CP47101 YDL159C-BYDL159C-B 177 nt-0.03□□□□□ -2.41
YJR030CP47101 YLR286W-AYLR286W-A 135 nt-0.03□□□□□ -2.41
YJR030CP47101 YER090C-AYER090C-A 90 nt-0.04□□□□□ -2.42
YJR030CP47101 TFB5YDR079C-A 219 nt-0.05□□□□□ -2.42
YJR030CP47101 YNL170WYNL170W 396 nt-0.06□□□□□ -2.42
YJR030CP47101 YLR299C-AYLR299C-A 93 nt-0.08□□□□□ -2.42
YJR030CP47101 ATP8Q0080 147 nt-0.1□□□□□ -2.43
YJR030CP47101 YML100W-AYML100W-A 174 nt-0.1□□□□□ -2.43
YJR030CP47101 PAU9YBL108C-A 129 nt-0.14□□□□□ -2.43
YJR030CP47101 snR67snR67 82 nt-0.15□□□□□ -2.43
YJR030CP47101 SBH2YER019C-A 267 nt-0.15□□□□□ -2.43
YJR030CP47101 YOL083C-AYOL083C-A 141 nt-0.17□□□□□ -2.44
YJR030CP47101 YML054C-AYML054C-A 159 nt-0.18□□□□□ -2.44
YJR030CP47101 Q0092Q0092 141 nt-0.19□□□□□ -2.44
YJR030CP47101 YJL113WYJL113W 4647 nt-0.2□□□□□ -2.44
YJR030CP47101 YNL103W-AYNL103W-A 90 nt-0.21□□□□□ -2.44
YJR030CP47101 YHR180C-BYHR180C-B 105 nt-0.22□□□□□ -2.44
YJR030CP47101 YBL071C-BYBL071C-B 99 nt-0.22□□□□□ -2.44
YJR030CP47101 tA(UGC)QtA(UGC)Q 76 nt-0.23□□□□□ -2.45
YJR030CP47101 SKI7YOR076C 2244 nt-0.25□□□□□ -2.45
YJR030CP47101 snR81snR81 201 nt-0.25□□□□□ -2.45
YJR030CP47101 YAL037C-AYAL037C-A 93 nt-0.25□□□□□ -2.45
YJR030CP47101 YGL041C-BYGL041C-B 183 nt-0.28□□□□□ -2.45
YJR030CP47101 YOL164W-AYOL164W-A 183 nt-0.28□□□□□ -2.45
YJR030CP47101 snR61snR61 90 nt-0.3□□□□□ -2.46
YJR030CP47101 snR47snR47 99 nt-0.34□□□□□ -2.46
YJR030CP47101 YBL100W-CYBL100W-C 120 nt-0.35□□□□□ -2.47
YJR030CP47101 RPL41AYDL184C 78 nt-0.36□□□□□ -2.47
YJR030CP47101 Q0143Q0143 153 nt-0.36□□□□□ -2.47
YJR030CP47101 YBR109W-AYBR109W-A 225 nt-0.36□□□□□ -2.47
YJR030CP47101 URB1YKL014C 5295 nt-0.37□□□□□ -2.47
YJR030CP47101 YBR296C-AYBR296C-A 120 nt-0.37□□□□□ -2.47
YJR030CP47101 YGR240C-AYGR240C-A 201 nt-0.38□□□□□ -2.47
YJR030CP47101 snR161snR161 161 nt-0.41□□□□□ -2.48
YJR030CP47101 tS(GCU)Q1tS(GCU)Q1 86 nt-0.42□□□□□ -2.48
YJR030CP47101 snR38snR38 95 nt-0.43□□□□□ -2.48
YJR030CP47101 YKL106C-AYKL106C-A 120 nt-0.48□□□□□ -2.49
YJR030CP47101 YOR376W-AYOR376W-A 156 nt-0.48□□□□□ -2.49
YJR030CP47101 snR85snR85 171 nt-0.49□□□□□ -2.49
YJR030CP47101 YDR034C-AYDR034C-A 177 nt-0.49□□□□□ -2.49
YJR030CP47101 snR62snR62 100 nt-0.51□□□□□ -2.49
YJR030CP47101 YMR326CYMR326C 309 nt-0.52□□□□□ -2.49
YJR030CP47101 YKL225WYKL225W 348 nt-0.53□□□□□ -2.49
YJR030CP47101 snR33snR33 183 nt-0.53□□□□□ -2.49
YJR030CP47101 YNR077CYNR077C 255 nt-0.56□□□□□ -2.5
YJR030CP47101 YHR217CYHR217C 462 nt-0.57□□□□□ -2.5
YJR030CP47101 YBL109WYBL109W 336 nt-0.59□□□□□ -2.5
YJR030CP47101 YHL009W-BYHL009W-B 5409 nt-0.59□□□□□ -2.5
YJR030CP47101 YOR316C-AYOR316C-A 210 nt-0.6□□□□□ -2.51
YJR030CP47101 snR77snR77 88 nt-0.67□□□□□ -2.52
YJR030CP47101 tP(UGG)QtP(UGG)Q 72 nt-0.67□□□□□ -2.52
YJR030CP47101 YLL066W-BYLL066W-B 171 nt-0.68□□□□□ -2.52
YJR030CP47101 snR64snR64 101 nt-0.7□□□□□ -2.52
YJR030CP47101 tT(UGU)G1tT(UGU)G1 72 nt-0.7□□□□□ -2.52
YJR030CP47101 tT(UGU)G2tT(UGU)G2 72 nt-0.7□□□□□ -2.52
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms